DRSC/TRiP Functional Genomics Resources

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Protein Alignment tilB and Cntrl

DIOPT Version :9

Sequence 1:NP_608460.1 Gene:tilB / 33130 FlyBaseID:FBgn0014395 Length:395 Species:Drosophila melanogaster
Sequence 2:XP_006234114.1 Gene:Cntrl / 311886 RGDID:1305317 Length:2336 Species:Rattus norvegicus


Alignment Length:321 Identity:88/321 - (27%)
Similarity:146/321 - (45%) Gaps:55/321 - (17%)


- Green bases have known domain annotations that are detailed below.


  Fly     4 ITEELVRK-KSEHNERLISTLEEISLHQEDIEVIEHIQNW--CRDLKILLLQSNLIARLENLHKL 65
            |||.|::| ..:.|..|:.:| .:||.::..:...:|:|.  |..|::|.|..||||::|.:.||
  Rat    83 ITEALIKKLTKQDNLALVKSL-NLSLSKDGGKKFRYIENLEKCVKLEVLNLSYNLIAKIEKVDKL 146

  Fly    66 KRLEYLNVAINNIERVENLEGCESLSKLDLTLN--------FIRELTS--VESLCGN-------- 112
            .||..||::.|.|.::|.||...:|.||:|..|        |.::|.|  |.:|.||        
  Rat   147 LRLRELNLSYNKISKIEGLENMCNLQKLNLAGNEIEHIPGWFSKKLKSLRVLNLKGNKISSLQDV 211

  Fly   113 ------YNLRELVLIGNPCVDYPHYRDYVVATLPQLNSLDCVEITPSERLRALRELSKNRSIIVQ 171
                  .:|..|.||.||.|..|||..:::..|..|.||:...:|..:|..|....|......::
  Rat   212 SKLKPLQDLTSLTLIDNPVVALPHYLQFIIFHLRSLESLEGQPVTTQDRQEAFERFSLEEIERLE 276

  Fly   172 KQVE-QDIERDEQRIRVAKQQSALAEHCAGIEDEEERIKAFWQAKSEHCPEIRTEIARQHRLGRE 235
            |.:| :.:|.:|    :..:|:...|.....:...:.:|.....:.:.|.|:.:::         
  Rat   277 KDLEKKTVETEE----LKNKQTKFLEEIKHQDKLNKSLKEEAMLQKQSCEELESDL--------- 328

  Fly   236 RHETKSPLDPLKPQR-NLFAPCGRPYNLNQA----KLPFKFRDEADHYLLQLEVYRHLDTS 291
              .||..|  ||.:. .|...|.:.|.|.|.    |:..|| :..::|..:   |..:|.|
  Rat   329 --NTKKEL--LKQKTVELTRACQKQYELEQELAFYKIDAKF-EPLNYYPSE---YAEMDKS 381

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
tilBNP_608460.1 LRR_9 1..174 CDD:258718 63/196 (32%)
leucine-rich repeat 23..45 CDD:275378 6/23 (26%)
LRR_4 46..86 CDD:289563 18/39 (46%)
leucine-rich repeat 46..67 CDD:275378 10/20 (50%)
leucine-rich repeat 68..89 CDD:275378 8/20 (40%)
leucine-rich repeat 90..114 CDD:275378 12/47 (26%)
CntrlXP_006234114.1 PPP1R42 89..261 CDD:411060 55/172 (32%)
leucine-rich repeat 100..119 CDD:275378 3/19 (16%)
leucine-rich repeat 127..148 CDD:275380 10/20 (50%)
leucine-rich repeat 149..170 CDD:275380 8/20 (40%)
leucine-rich repeat 171..194 CDD:275380 7/22 (32%)
leucine-rich repeat 195..219 CDD:275380 4/23 (17%)
leucine-rich repeat 220..246 CDD:275380 11/25 (44%)
PTZ00108 <267..535 CDD:240271 27/136 (20%)
SMC_prok_B <438..1120 CDD:274008
Drf_FH1 1238..>1300 CDD:399386
SMC_prok_B 1396..2215 CDD:274008
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E2759_KOG0531
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
32.810

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