DRSC/TRiP Functional Genomics Resources

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Protein Alignment tilB and LRRC43

DIOPT Version :9

Sequence 1:NP_608460.1 Gene:tilB / 33130 FlyBaseID:FBgn0014395 Length:395 Species:Drosophila melanogaster
Sequence 2:XP_016874613.1 Gene:LRRC43 / 254050 HGNCID:28562 Length:664 Species:Homo sapiens


Alignment Length:158 Identity:53/158 - (33%)
Similarity:81/158 - (51%) Gaps:10/158 - (6%)


- Green bases have known domain annotations that are detailed below.


  Fly    23 LEEISLHQEDIEVIEHIQNWCRDLKILLLQSNLIARLENL--HKLKRLEYLNVAINN-IERVENL 84
            |||:.|....|:.:: ..|....||:|.|..|.|:.:|.|  |....|::|.:..|. :..:|:|
Human   159 LEELVLSANRIKEVD-ATNLPPTLKVLELYGNEISSMECLCAHPPAGLQHLGLGHNKLLGPLESL 222

  Fly    85 ----EGCESLSKLDLTLNFIRELTS-VESLCGNYNLRELVLIGNPCVDYPHYRDYVVATLPQLNS 144
                ....:|..|||..|.:.:|.| |.||....:||.|||.|||....|:||...:.:|.||..
Human   223 YVTANHWPNLVSLDLGFNDLTDLQSMVTSLRTLRHLRLLVLQGNPLALVPYYRGLTIDSLAQLCV 287

  Fly   145 LDCVEITPSERLRALRELSKNRSIIVQK 172
            ||.:.::|:|: ...|.||.|..::.|:
Human   288 LDDITVSPNEK-HLFRGLSLNGDLLAQE 314

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
tilBNP_608460.1 LRR_9 1..174 CDD:258718 53/158 (34%)
leucine-rich repeat 23..45 CDD:275378 6/21 (29%)
LRR_4 46..86 CDD:289563 14/46 (30%)
leucine-rich repeat 46..67 CDD:275378 9/22 (41%)
leucine-rich repeat 68..89 CDD:275378 5/25 (20%)
leucine-rich repeat 90..114 CDD:275378 10/24 (42%)
LRRC43XP_016874613.1 None


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E2759_KOG0531
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
User_Submission 00.000 Not matched by this tool.
10.900

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