DRSC/TRiP Functional Genomics Resources

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Protein Alignment tilB and lrrc56

DIOPT Version :10

Sequence 1:NP_608460.1 Gene:tilB / 33130 FlyBaseID:FBgn0014395 Length:395 Species:Drosophila melanogaster
Sequence 2:XP_009296335.1 Gene:lrrc56 / 100149369 ZFINID:ZDB-GENE-081223-1 Length:607 Species:Danio rerio


Alignment Length:521 Identity:103/521 - (19%)
Similarity:161/521 - (30%) Gaps:211/521 - (40%)


- Green bases have known domain annotations that are detailed below.


  Fly    16 NERLISTLEEISLHQEDIEVIEHIQNWCRDLKILLLQSNLIARLENLHKLKRLEYLNVAINNIER 80
            |..|||::.::...      :.|:|       ||.|....:..||.|..|..|:.|.||.|:|..
Zfish    92 NNSLISSVRDLGTS------LSHLQ-------ILWLARCSLTDLEGLPALSSLKELYVAYNSISD 143

  Fly    81 VENLEGCESLSKLDLTLNFIRELTSVESLCGNYNLRELVLIGNP---CVD-------YPHYRDYV 135
            :..:...|:|..|||..|.:.||..:..|.....||.|.|.|||   |.|       :..||..|
Zfish   144 LSPVSMLENLELLDLEGNNVDELAQLWYLGCCEKLRTLSLEGNPVCTCPDSGKLEASHYSYRSVV 208

  Fly   136 VATLPQLNSLD--CVEITPSE-------RLRALRELSKNRSIIV----------QKQVE------ 175
            ...:||||.||  .||:..|:       ....|:|..|:.|:||          ::.|.      
Zfish   209 RELIPQLNILDDVPVELEKSQCNGSSLLDWTLLKESIKDSSVIVDLDHRDAAIEERSVSESGIRP 273

  Fly   176 ---------------------------------------------------------------QD 177
                                                                           |.
Zfish   274 ASALPLDLRNSPRSLSNHLDSARPSTFCTGSRPGSAGSVLAILNHEASDLTNGVGTVLCGNPLQA 338

  Fly   178 IERDEQRIRVAKQQSALA---------------------------------------EHCAGIE- 202
            :....|:|::...||.:.                                       :|...|| 
Zfish   339 VRARRQKIKLQNSQSQIQPSTQLSSYIPEHTYDFEQSSSQDRSDVFAELRSWRIEHNKHLLAIEK 403

  Fly   203 DEEERIKAFWQAKSEHCPEIRTEIARQHRLGRE-RHETKSP------LDPLKPQR---------- 250
            |::.::.:...:..||..|.:    ..|.:.|: ..:..||      |.|..|:.          
Zfish   404 DQQPQVMSIHHSDDEHDDEDK----HNHSITRDASRDASSPDSSIQSLSPESPEMLRLTSSSGCS 464

  Fly   251 -------NLFAPCG------------RPYNLNQAKLPF-KFRDEADHYLLQLEVYRHLDTSLIDV 295
                   |:..|..            ||:....:.|.. |...|.||        |:|     .|
Zfish   465 MSPSPPPNVTLPLAGRRTTQIRTRRFRPHKAEVSNLRLSKETTETDH--------RNL-----CV 516

  Fly   296 DVQTTYTRVTVKKKIFQIAYSEEVKPDESTVQRSQITGHLVVNLKKLKVNELL---IAKKSPTKS 357
            ...||.|.:|...:|....:.....|.:|.: |.:|||:  ..|.:::...::   .:||.|.:.
Zfish   517 QNNTTVTSLTAPPQIVHKPHRPSTSPADSPL-RMKITGN--QQLSEIQPKPIIHSNTSKKLPPRR 578

  Fly   358 P 358
            |
Zfish   579 P 579

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
tilBNP_608460.1 PPP1R42 <23..155 CDD:455733 45/150 (30%)
leucine-rich repeat 23..45 CDD:275378 2/21 (10%)
leucine-rich repeat 46..67 CDD:275378 7/20 (35%)
leucine-rich repeat 68..89 CDD:275378 6/20 (30%)
leucine-rich repeat 90..114 CDD:275378 8/23 (35%)
lrrc56XP_009296335.1 PPP1R42 83..223 CDD:455733 46/143 (32%)
leucine-rich repeat 86..108 CDD:275380 4/21 (19%)
leucine-rich repeat 109..130 CDD:275380 8/27 (30%)

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