DRSC/TRiP Functional Genomics Resources

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Protein Alignment tilB and lrrc56

DIOPT Version :9

Sequence 1:NP_608460.1 Gene:tilB / 33130 FlyBaseID:FBgn0014395 Length:395 Species:Drosophila melanogaster
Sequence 2:XP_009296335.1 Gene:lrrc56 / 100149369 ZFINID:ZDB-GENE-081223-1 Length:607 Species:Danio rerio


Alignment Length:521 Identity:103/521 - (19%)
Similarity:161/521 - (30%) Gaps:211/521 - (40%)


- Green bases have known domain annotations that are detailed below.


  Fly    16 NERLISTLEEISLHQEDIEVIEHIQNWCRDLKILLLQSNLIARLENLHKLKRLEYLNVAINNIER 80
            |..|||::.::...      :.|:|       ||.|....:..||.|..|..|:.|.||.|:|..
Zfish    92 NNSLISSVRDLGTS------LSHLQ-------ILWLARCSLTDLEGLPALSSLKELYVAYNSISD 143

  Fly    81 VENLEGCESLSKLDLTLNFIRELTSVESLCGNYNLRELVLIGNP---CVD-------YPHYRDYV 135
            :..:...|:|..|||..|.:.||..:..|.....||.|.|.|||   |.|       :..||..|
Zfish   144 LSPVSMLENLELLDLEGNNVDELAQLWYLGCCEKLRTLSLEGNPVCTCPDSGKLEASHYSYRSVV 208

  Fly   136 VATLPQLNSLD--CVEITPSE-------RLRALRELSKNRSIIV----------QKQVE------ 175
            ...:||||.||  .||:..|:       ....|:|..|:.|:||          ::.|.      
Zfish   209 RELIPQLNILDDVPVELEKSQCNGSSLLDWTLLKESIKDSSVIVDLDHRDAAIEERSVSESGIRP 273

  Fly   176 ---------------------------------------------------------------QD 177
                                                                           |.
Zfish   274 ASALPLDLRNSPRSLSNHLDSARPSTFCTGSRPGSAGSVLAILNHEASDLTNGVGTVLCGNPLQA 338

  Fly   178 IERDEQRIRVAKQQSALA---------------------------------------EHCAGIE- 202
            :....|:|::...||.:.                                       :|...|| 
Zfish   339 VRARRQKIKLQNSQSQIQPSTQLSSYIPEHTYDFEQSSSQDRSDVFAELRSWRIEHNKHLLAIEK 403

  Fly   203 DEEERIKAFWQAKSEHCPEIRTEIARQHRLGRE-RHETKSP------LDPLKPQR---------- 250
            |::.::.:...:..||..|.:    ..|.:.|: ..:..||      |.|..|:.          
Zfish   404 DQQPQVMSIHHSDDEHDDEDK----HNHSITRDASRDASSPDSSIQSLSPESPEMLRLTSSSGCS 464

  Fly   251 -------NLFAPCG------------RPYNLNQAKLPF-KFRDEADHYLLQLEVYRHLDTSLIDV 295
                   |:..|..            ||:....:.|.. |...|.||        |:|     .|
Zfish   465 MSPSPPPNVTLPLAGRRTTQIRTRRFRPHKAEVSNLRLSKETTETDH--------RNL-----CV 516

  Fly   296 DVQTTYTRVTVKKKIFQIAYSEEVKPDESTVQRSQITGHLVVNLKKLKVNELL---IAKKSPTKS 357
            ...||.|.:|...:|....:.....|.:|.: |.:|||:  ..|.:::...::   .:||.|.:.
Zfish   517 QNNTTVTSLTAPPQIVHKPHRPSTSPADSPL-RMKITGN--QQLSEIQPKPIIHSNTSKKLPPRR 578

  Fly   358 P 358
            |
Zfish   579 P 579

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
tilBNP_608460.1 LRR_9 1..174 CDD:258718 55/186 (30%)
leucine-rich repeat 23..45 CDD:275378 2/21 (10%)
LRR_4 46..86 CDD:289563 13/39 (33%)
leucine-rich repeat 46..67 CDD:275378 7/20 (35%)
leucine-rich repeat 68..89 CDD:275378 6/20 (30%)
leucine-rich repeat 90..114 CDD:275378 8/23 (35%)
lrrc56XP_009296335.1 leucine-rich repeat 86..108 CDD:275380 4/21 (19%)
LRR_9 88..229 CDD:258718 48/149 (32%)
LRR_4 108..148 CDD:289563 15/46 (33%)
leucine-rich repeat 109..130 CDD:275380 8/27 (30%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
10.910

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