DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Cyp6t1 and cyp4v2.2

DIOPT Version :9

Sequence 1:NP_608457.1 Gene:Cyp6t1 / 33127 FlyBaseID:FBgn0031182 Length:529 Species:Drosophila melanogaster
Sequence 2:NP_001072667.1 Gene:cyp4v2.2 / 780124 XenbaseID:XB-GENE-977085 Length:523 Species:Xenopus tropicalis


Alignment Length:571 Identity:141/571 - (24%)
Similarity:236/571 - (41%) Gaps:108/571 - (18%)


- Green bases have known domain annotations that are detailed below.


  Fly     4 VFSLIAAALAVGSLVLLPVVLRGGCLLVVTIVWLWQILHFWHWRRLGVPFV---PAAPFVGNVWN 65
            |..|:..|.||..|.||.:.:            |..:..:...||:..|..   |..|.:|:...
 Frog     7 VHLLVWVAAAVVLLTLLALSI------------LPALQDYVRKRRILKPIPGPGPNYPLIGDALF 59

  Fly    66 LLRGACCFGDQFRELYESKEAAG-----RAFVG----IDVLHNHALLLRDPAL-IKRIMVEDFAQ 120
            |....   ||.|.::.|..|:..     :.::|    |.|.|...:   :|.| ..:.|.:.|. 
 Frog    60 LKNNG---GDFFLQICEYTESYRLQPLLKVWIGTIPFIVVYHADTV---EPVLSSSKHMDKAFL- 117

  Fly   121 FSSRFETTDPTCDTMGSQNLFFSKYETWRETHKIFAPFFAAGKVRNMYGLLENIGQKLEEHMEQK 185
                ::...|..    .:.|..|..|.||...|:..|.|....:.....::....:.|.|.::..
 Frog   118 ----YKFLHPWL----GKGLLTSTGEKWRSRRKMITPTFHFAILSEFLEVMNEQSKILVEKLQTH 174

  Fly   186 LSGRDSME--LEVKQLCALFTTDIIASLAFGIEAHSLQNPEAEFRRMCIEVND--PRPKRLLHLF 246
            :.| :|.:  ::| .||||   |||:..|.|.:..:..|.::|:.:...:::|  .|.:::..|:
 Frog   175 VDG-ESFDCFMDV-TLCAL---DIISETAMGRKIQAQSNRDSEYVQAIYKMSDIIQRRQKMPWLW 234

  Fly   247 TMFFFPRLSHRVGTHLYSEEYE---RFMRKSMDYVLSQRAES----GENRHDLID---------- 294
            ..|.:..|  |.|     :|::   :.:....|..:.:|||.    ||.:.:..|          
 Frog   235 LDFLYAHL--RDG-----KEHDKNLKILHSFTDKAILERAEELKKMGEQKKEHCDSDPESDKPKK 292

  Fly   295 --IFLQ--LKRTEPAESIIHRPDFFAAQAAFLLLAGFDTSSSTITFALYELAKNTTIQDRLRTEL 355
              .||.  |..|:.|.:.:...|.......| :..|.||:::.:.::|:.|..:...|.::..||
 Frog   293 RSAFLDMLLMATDDAGNKMSYMDIREEVDTF-MFEGHDTTAAALNWSLFLLGSHPEAQRQVHKEL 356

  Fly   356 RAALQSSQDRQLSCDTVTGLVYLRQVVDEVLRLYPPTAFLDRC----CNSRTGYDLSPWNGGSPF 416
            ......| ||.::.|.:..|.||..|:.|.||:||......|.    |:.|            .|
 Frog   357 DEVFGKS-DRPVTMDDLKKLRYLEAVIKESLRIYPSVPLFGRTVTEDCSIR------------GF 408

  Fly   417 KLRAGTPVYISVLGIHRDAQYWPNPEVFDPERFSAEQRQQHHPMTYLPFGAGPRGCIGTLLGQLE 481
            .:..|..|.|....:|||.:|:|.||.|.||||..|.....:|..|:||.||.|.|||.....:|
 Frog   409 HVPKGVNVVIIPYALHRDPEYFPEPEEFRPERFFPENASGRNPYAYIPFSAGLRNCIGQRFALME 473

  Fly   482 IKVGLLHILNHFRVEVCER-----TLPEMRFDPKAFVLTAHNGTYLRFVKN 527
            .||.|..||.::.||..::     .|.|:       :|...:|.::: :||
 Frog   474 EKVVLSSILRNYWVEASQKREELCLLGEL-------ILRPQDGMWIK-LKN 516

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Cyp6t1NP_608457.1 p450 91..515 CDD:299894 116/462 (25%)
cyp4v2.2NP_001072667.1 p450 45..509 CDD:365848 126/511 (25%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D1247045at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
11.010

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