DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Cyp6t1 and cyp4v2.1

DIOPT Version :9

Sequence 1:NP_608457.1 Gene:Cyp6t1 / 33127 FlyBaseID:FBgn0031182 Length:529 Species:Drosophila melanogaster
Sequence 2:XP_002934446.1 Gene:cyp4v2.1 / 100485929 XenbaseID:XB-GENE-22069503 Length:523 Species:Xenopus tropicalis


Alignment Length:544 Identity:131/544 - (24%)
Similarity:209/544 - (38%) Gaps:121/544 - (22%)


- Green bases have known domain annotations that are detailed below.


  Fly    24 LRGGCLLVVTIVWLWQILHFWHWRRLGVPFVPAAPFVGNVWNLLR------------GACCF--- 73
            |||...|:|.:.....:|..     |.:..:||.......|.|::            |...|   
 Frog     3 LRGEVHLLVWVAAAVVLLTL-----LALSILPALQDYVRKWKLMKPIPGPGPNYPIVGDALFLKP 62

  Fly    74 --GDQFRELYESKEAAGRAFVGIDVLHNHALLLRDPALIK-------RIMVEDFAQFSSRFETTD 129
              ||.|.::.|..|:                 .|...|||       .|:|       ...:|.:
 Frog    63 NGGDFFLQMCEFTES-----------------FRSEPLIKIWIGPIPFIIV-------YHADTVE 103

  Fly   130 PTCDT----------------MGSQNLFFSKYETWRETHKIFAPFFAAGKVRNMYGLLENIGQKL 178
            |...|                :| :.|..|..|.||...|:..|.|....:.....::....:.|
 Frog   104 PILSTSKHMDKAYSYKFLHPWLG-KGLLTSTGEKWRSRRKMITPTFHFAILSEFLEVMNEQSKIL 167

  Fly   179 EEHMEQKLSGRDSMELEVKQLCALFTTDIIASLAFGIEAHSLQNPEAEFRRMCIEVND--PRPKR 241
            .|.:::.:.|..........||||   |||:..|.|.:..:..|.::|:.....:::|  .|.::
 Frog   168 VEKLQKHVDGESFNCFMDVTLCAL---DIISETAMGRKIQAQSNRDSEYVHAIYKMSDIIQRRQK 229

  Fly   242 LLHLFTMFFFPRLSHRVGTHLYSEEYE---RFMRKSMDYVLSQRAES----GENRHDLID----- 294
            :..|:..||:..|..       .:|::   :.:....|..:.:|||.    ||.:.:..|     
 Frog   230 MPWLWLDFFYAYLKD-------GKEHDKNLKILHAFTDKAILERAEELKKMGEQKKEHCDSDPES 287

  Fly   295 -------IFLQ--LKRTEPAESIIHRPDFFAAQAAFLLLAGFDTSSSTITFALYELAKNTTIQDR 350
                   .||.  |..|:.|.:.:...|.......| :..|.||:::.:.::|:.|..:...|.:
 Frog   288 DKPKKRSAFLDMLLMATDDAGNKMSYMDIREEVDTF-MFEGHDTTAAALNWSLFLLGSHPEAQRQ 351

  Fly   351 LRTELRAALQSSQDRQLSCDTVTGLVYLRQVVDEVLRLYPPTAFLDRC----CNSRTGYDLSPWN 411
            :..||......| ||.::.|.:..|.||..|:.|.||:||...|..|.    |:.|         
 Frog   352 VHKELDEVFGKS-DRPVTMDDLKKLRYLEAVIKEALRIYPSVPFFARTVTEDCSIR--------- 406

  Fly   412 GGSPFKLRAGTPVYISVLGIHRDAQYWPNPEVFDPERFSAEQRQQHHPMTYLPFGAGPRGCIGTL 476
               .|.:..|..|.|....:|||.:|:|.||.|.||||..|.....:|..|:||.||.|.|||..
 Frog   407 ---GFHVPKGVNVVIIPYALHRDPEYFPEPEEFRPERFFPENASGRNPYAYIPFSAGLRNCIGQR 468

  Fly   477 LGQLEIKVGLLHILNHFRVEVCER 500
            ...:|.||.|..||.::.||..::
 Frog   469 FALMEEKVVLSSILRNYWVEASQK 492

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Cyp6t1NP_608457.1 p450 91..515 CDD:299894 113/460 (25%)
cyp4v2.1XP_002934446.1 p450 45..509 CDD:365848 120/497 (24%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D1247045at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
11.010

Return to query results.
Submit another query.