DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Ir20a and Ir7f

DIOPT Version :9

Sequence 1:NP_608456.1 Gene:Ir20a / 33126 FlyBaseID:FBgn0031181 Length:563 Species:Drosophila melanogaster
Sequence 2:NP_001138177.1 Gene:Ir7f / 7354418 FlyBaseID:FBgn0259188 Length:621 Species:Drosophila melanogaster


Alignment Length:711 Identity:131/711 - (18%)
Similarity:238/711 - (33%) Gaps:266/711 - (37%)


- Green bases have known domain annotations that are detailed below.


  Fly     3 ASLNRSTG-------LSAELLDLYG------------LVVHFLLSGEHTTLVYFNPAGLDCSWGV 48
            :||:..:|       |....:|:.|            ||:..:|:...||||.           .
  Fly    11 SSLSSGSGYSIYKSYLENSRIDMQGEDANLYVARALRLVIENVLAQLSTTLVV-----------T 64

  Fly    49 LWQRNL-TAHPQIVWQRNYSYPDLYYQFNAKLLVLACLPMDS--RAAIQL-----EILANSLSHL 105
            :..|:| |||              ::::...:|      |||  ..|:||     :::.|.:...
  Fly    65 ISTRHLGTAH--------------WFEYMMNIL------MDSWRMVAVQLLRIRPDLVVNPVPGR 109

  Fly   106 RTVVRLLIE----------------VAGPDQVTL---ARQY---------LSFCLRRSMLHVELY 142
            :.|..|:::                ...||...:   ||.:         |..||....||..:.
  Fly   110 KRVSLLMVDSYQGLLDTNITASNANFDDPDYYFIFLQARDHLIPKELQLILDHCLAHFWLHCNVM 174

  Fly   143 FRDYHHSLILYSF---------RAFP----SFELVMRWISVGQGVKLFLHKLDDLRGHRLRVIPD 194
            .:.....:::|::         :|:|    :|: ..:|    :..::|..||..:.|..|.|:..
  Fly   175 IQTAQVEVLVYTYYPYTADACQKAYPIPVNTFD-GRKW----KASQMFPDKLSQMHGCPLTVLTW 234

  Fly   195 LSPPNTFFYRDARGD-NQVTGYLWDFLATFAGRLNAGLEVV-----RPSWRAGSASDSSYML-EY 252
            ..||......|.:.: ::.:|:....:...|.|:|..||:|     ||         ::|.| |.
  Fly   235 HQPPFVELVWDPKHNRSRGSGFEIQLVEHLARRMNFSLELVNIALLRP---------NAYRLAEG 290

  Fly   253 SAKGLID----------VG-----------LTTTL------------ITKWNLWAIHQYTYPLLV 284
            |::|.|:          :|           |||.:            :.::.:.::....:|..:
  Fly   291 SSEGPIEKLLQRNVNISMGYFRKTARRNQLLTTPMSYYSANLVAVLQLERYRIGSLALLVFPFEL 355

  Fly   285 SSWCTMLPVEKPLATPDLFGRIVCPTLAMTLLLII------------------LVTWLVFRQLRC 331
            |.|..:|                   ||:.:.|.|                  :|..|:...|..
  Fly   356 SVWMLLL-------------------LALLIHLGIHLPSARRGNEEDGGGGLQVVALLLGAALAR 401

  Fly   332 LTR-----------LKNSRPARI-----VPHLLTLLLLTTCSAQLLSLLIFPPYHVRIASFEDLL 380
            |.|           |..|.|.||     :.||:.|.|..|.|..|..||......:..|:.:.||
  Fly   402 LPRSWRHRFIAAHWLWASIPLRISYQSLLFHLIRLQLYNTPSFSLDQLLAEGFQGICTANTQRLL 466

  Fly   381 RGDQKILGMRNEFYNFDGAFRARYAGVFYLIDDPNELYDLRNHFNTTWAYTMPYIKWLVIKTQQR 445
                  |.|..                  |..||:.:..:...|:           |.|:....|
  Fly   467 ------LEMPQ------------------LARDPDSIQSVDTPFD-----------WDVLNVLTR 496

  Fly   446 HFSKPLFRWSKDLCFFDFMPTS-------VIVAP------------DSIYWESIKDFTFRIHQAG 491
            :.::.:|..:.......|:.:|       |:..|            .|..:|.:.|...|:..:|
  Fly   497 NRNRKIFAVANQDVTLSFLHSSAHPNAFHVVKQPVNVEYAGMYMPKHSFLYEKMDDDIRRLDASG 561

  Fly   492 LMKHWIRKSFYDMIKAGKMSIKDYSDLETLKPLNIGDLEIVWRVCGAAIAVASAIFIMELL 552
            .:..|.|.||..:.:      |:...:.:.:.:|...|..::.|......:|..:|..|:|
  Fly   562 FIHAWRRASFASVHR------KEQVHMTSRRYINHAKLSGIYMVMAGLYLLAGLLFAGEVL 616

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Ir20aNP_608456.1 None
Ir7fNP_001138177.1 Periplasmic_Binding_Protein_Type_2 231..>358 CDD:304360 25/135 (19%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - P PTHR42643
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
11.100

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