DRSC/TRiP Functional Genomics Resources

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Protein Alignment Ir20a and Ir100a

DIOPT Version :9

Sequence 1:NP_608456.1 Gene:Ir20a / 33126 FlyBaseID:FBgn0031181 Length:563 Species:Drosophila melanogaster
Sequence 2:NP_651898.2 Gene:Ir100a / 43753 FlyBaseID:FBgn0039879 Length:603 Species:Drosophila melanogaster


Alignment Length:673 Identity:114/673 - (16%)
Similarity:212/673 - (31%) Gaps:262/673 - (38%)


- Green bases have known domain annotations that are detailed below.


  Fly    47 GVLWQRNLTAHPQIVWQRNYSYPDLYYQFNAKLLVLACLPMDSRAAIQLEILANSLSHLRT---- 107
            |.|.|.|.|.|.|                     ||..:.......::|        ||||    
  Fly    15 GTLGQANNTDHKQ---------------------VLTSIVKQLEGGLEL--------HLRTSEDG 50

  Fly   108 ---VVRLLIEVAG-----------PDQVTLARQYLSFC--------LRRSMLHVELYF------- 143
               :|:.|::...           |.:..:.|.:....        :|.|:.:.:.::       
  Fly    51 GNDLVQFLMQEKSSIIISAKQEEVPSRAKIMRHHFFIFDGVHQMQEIRTSLFNTDGFYILALENN 115

  Fly   144 ----------------RDYHHSLILY---SFRAFPSFELVMRWISVGQGVKLFLHKLDDLRGHRL 189
                            ..:.||.|.|   |.::...|...::.:.|.|..|.:.....||.|:.|
  Fly   116 TIEDDVLLMEFAADVWLQHGHSRIYYVQLSKKSVLLFNPFLQRLVVVQDSKTYSRIYKDLEGYHL 180

  Fly   190 RV-IPDLSPPNTFFYRDARGDNQ-----VTGYLWDFLATFAGRLNAGLEVVRP--SWRAGSASDS 246
            |: |.|      ..|....||.:     |||.......|.|.:||...:.|.|  .:..|..::.
  Fly   181 RIYIFD------SVYSSVIGDGENKVLSVTGADAKLAKTVARQLNFTADFVWPDDEFFGGRLANG 239

  Fly   247 SYMLEYSA------KGLIDV---------GLTTTLITKWNLWAIHQYTYPLLVSSWCTMLPVEKP 296
                |||.      :|.:|:         .|||.:          |::..:.:...|  |.|:|.
  Fly   240 ----EYSGGVGRAHRGEVDIIFAGFFIKDYLTTHI----------QFSAAVYMDELC--LYVKKA 288

  Fly   297 LATPDLFGRIVCPTLAMTL---LLIILV------TWLVFRQLRCLTRLK----NSRPARI----- 343
            ...|    :.:.|..|:.:   |..:||      .||:.|.:..:..::    .||..||     
  Fly   289 QRIP----QSILPLFAVHMDVWLCFLLVGLLGALVWLILRAVNLILGIEGVPDGSRATRISYFGA 349

  Fly   344 -------------------VP--HLLTLLLLTTC----------SAQLLSLLIFP---------- 367
                               .|  |...:.:.:.|          .:.|.::.|.|          
  Fly   350 ARRIFVDTWVIWVRVNVGRFPPFHSERIFVASLCLVSVIFGALLESSLATVYIRPLYYRDVNTLR 414

  Fly   368 -------PYHVRIASFED--------------------LLRGDQKILGMRNEFYNFDGAFRARYA 405
                   |.:::..:|:|                    :..|:::::.|.::...|.|..|:...
  Fly   415 ELDESGQPIYIKHPAFKDDLFYGHNSEVYRRLDAKMMLVAEGEERLIEMVSKRGGFAGVTRSASL 479

  Fly   406 GVFYLIDDPNELYDLRNHFNTTWAYTMPYIKWLVIKTQQRHFSKPLFRWSKDLCFFDFMPTSVIV 470
                      :|.|:|        |.|         |::.|        ....|..::....|:.
  Fly   480 ----------QLSDIR--------YVM---------TKKVH--------KIPECPKNYHIAYVLP 509

  Fly   471 APDSIYWESIKDFTFRIHQAGLMKHWIRKSFYDMIKAGKMSIKDYS------DLETLKPLNIGDL 529
            .| |.|.|.:.....|:...|::..|..::    .:..|.||:.:.      |:...|.|.:.|:
  Fly   510 RP-SPYLEEVNRIVLRLVAGGIVGLWTGEA----KERAKWSIQRFPEYLAELDVGRWKVLTLSDV 569

  Fly   530 EIVWRVCGAAIAVASAIFIMELL 552
            ::.:........:::.:.:.|:|
  Fly   570 QLAFYALTIGCLLSAIVCMAEIL 592

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Ir20aNP_608456.1 None
Ir100aNP_651898.2 Periplasmic_Binding_Protein_Type_2 210..>255 CDD:304360 11/48 (23%)
Lig_chan <439..580 CDD:278489 28/180 (16%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - P PTHR42643
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
11.100

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