DRSC/TRiP Functional Genomics Resources

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Protein Alignment Ir20a and Ir68a

DIOPT Version :10

Sequence 1:NP_608456.1 Gene:Ir20a / 33126 FlyBaseID:FBgn0031181 Length:563 Species:Drosophila melanogaster
Sequence 2:NP_648455.2 Gene:Ir68a / 39269 FlyBaseID:FBgn0036150 Length:704 Species:Drosophila melanogaster


Alignment Length:616 Identity:111/616 - (18%)
Similarity:185/616 - (30%) Gaps:250/616 - (40%)


- Green bases have known domain annotations that are detailed below.


  Fly    43 DCSWGVL-----WQRNLTAHPQIVWQR--NYSYPDLYYQFNAKLLVLACLPMDSRAAIQLEILAN 100
            ||...|:     ||          .||  .|.|.:.......|.::|.          .|.:..:
  Fly   110 DCELNVITILNGWQ----------VQRFLGYIYDNRSLNMQKKFVLLH----------DLRLFES 154

  Fly   101 SLSHLRTVVRLLIEVAGPDQVTLARQYLSFCLRRSMLHVELYFRDYHHSLILYSFRAFPSFELVM 165
            .:.||.:|.        .|.:.|.||.                 |..:::...:|....|..|||
  Fly   155 DMIHLWSVF--------IDAIFLKRQL-----------------DNKYTISTIAFPGILSGVLVM 194

  Fly   166 RWIS---VGQGVK---LFLHKLDDLRGHRLRVI-------------------------------- 192
            :.|:   :|:|:.   ||..|..:|.|..|.|.                                
  Fly   195 KNIANWELGKGLNGRILFADKTSNLFGTSLPVAISEHVPMVLWANATKSFQGVEVEIMNALGKAL 259

  Fly   193 ---PDLSPPNTFFYRD----------ARGDNQVTGY----------LWDFLATFAGRLNAG---- 230
               |....||.....|          |.|.....||          |.|.:|..:.|...|    
  Fly   260 NFKPVYYKPNQTENMDWTELDGGASVAYGSGNPDGYAQNGTHIDSMLVDEVAAHSARFAIGDLHL 324

  Fly   231 ----LEVVRPS----------WRAGSASDSS---YMLEYSAKGLIDVGLTTTLITKWNLWAI--- 275
                |::|..|          ....|::|:|   ::|.:||...:.| |.:..:.....:||   
  Fly   325 FQVYLKLVELSAPHNFECLTFLTPESSTDNSWQTFILPFSAGMWVGV-LLSLFVVGTVFYAISFL 388

  Fly   276 -----------------------------HQYTYPLLVSSWCTMLPVEKPLATPDLF-GRIVCPT 310
                                         .:.::.:.:|.:.:......|   .||| |...|..
  Fly   389 NAIINGNVSSEFFRCLRPNRNVPMDPKIYRRISFRIAISRYRSSKGDRMP---RDLFDGYTNCIL 450

  Fly   311 LAMTLLLIILVTWLVFRQLRCLTRLKNSRPARIVP---HLLTLLLLTTCSAQLLSLLIFPPYHVR 372
            |..::||.:           .|.|:..:.|.|::.   .:..:||:.|..|...::|..|...|.
  Fly   451 LTYSMLLYV-----------ALPRMPRNWPLRVLTGWYWIYCILLVATYRASFTAILANPAARVT 504

  Fly   373 IASFEDLLR-------------------GDQ--KILGMRNEFYNFDGAFRARYAG---VFYLIDD 413
            |.:.|||||                   .|:  :.:|.:.|.:.:.....:|.|.   .:|    
  Fly   505 IDTLEDLLRSHIPPSTGATENRQFFLEANDEVARKVGEKMEVFGYSDDLTSRIAKGQCAYY---- 565

  Fly   414 PNELYDLRN-----------HFNTTWAYTMPYIKWLVIKTQQRHFSKP--------------LFR 453
            .||.| ||.           |........||    :|:..::....||              :.:
  Fly   566 DNEFY-LRYLRVADESGSALHIMKECVLYMP----VVLAMEKNSALKPRVDASIQHLAEGGLIAK 625

  Fly   454 WSKDLCFFDFMPTSVIVAPDSI-----YWES 479
            |.||.  .:.:|...:...:::     :|.|
  Fly   626 WLKDA--IEHLPAEALAQQEALMNIQKFWSS 654

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Ir20aNP_608456.1 None
Ir68aNP_648455.2 Lig_chan 367..661 CDD:459656 54/314 (17%)

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