DRSC/TRiP Functional Genomics Resources

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Protein Alignment Ir20a and Ir68a

DIOPT Version :9

Sequence 1:NP_608456.1 Gene:Ir20a / 33126 FlyBaseID:FBgn0031181 Length:563 Species:Drosophila melanogaster
Sequence 2:NP_648455.2 Gene:Ir68a / 39269 FlyBaseID:FBgn0036150 Length:704 Species:Drosophila melanogaster


Alignment Length:616 Identity:111/616 - (18%)
Similarity:185/616 - (30%) Gaps:250/616 - (40%)


- Green bases have known domain annotations that are detailed below.


  Fly    43 DCSWGVL-----WQRNLTAHPQIVWQR--NYSYPDLYYQFNAKLLVLACLPMDSRAAIQLEILAN 100
            ||...|:     ||          .||  .|.|.:.......|.::|.          .|.:..:
  Fly   110 DCELNVITILNGWQ----------VQRFLGYIYDNRSLNMQKKFVLLH----------DLRLFES 154

  Fly   101 SLSHLRTVVRLLIEVAGPDQVTLARQYLSFCLRRSMLHVELYFRDYHHSLILYSFRAFPSFELVM 165
            .:.||.:|.        .|.:.|.||.                 |..:::...:|....|..|||
  Fly   155 DMIHLWSVF--------IDAIFLKRQL-----------------DNKYTISTIAFPGILSGVLVM 194

  Fly   166 RWIS---VGQGVK---LFLHKLDDLRGHRLRVI-------------------------------- 192
            :.|:   :|:|:.   ||..|..:|.|..|.|.                                
  Fly   195 KNIANWELGKGLNGRILFADKTSNLFGTSLPVAISEHVPMVLWANATKSFQGVEVEIMNALGKAL 259

  Fly   193 ---PDLSPPNTFFYRD----------ARGDNQVTGY----------LWDFLATFAGRLNAG---- 230
               |....||.....|          |.|.....||          |.|.:|..:.|...|    
  Fly   260 NFKPVYYKPNQTENMDWTELDGGASVAYGSGNPDGYAQNGTHIDSMLVDEVAAHSARFAIGDLHL 324

  Fly   231 ----LEVVRPS----------WRAGSASDSS---YMLEYSAKGLIDVGLTTTLITKWNLWAI--- 275
                |::|..|          ....|::|:|   ::|.:||...:.| |.:..:.....:||   
  Fly   325 FQVYLKLVELSAPHNFECLTFLTPESSTDNSWQTFILPFSAGMWVGV-LLSLFVVGTVFYAISFL 388

  Fly   276 -----------------------------HQYTYPLLVSSWCTMLPVEKPLATPDLF-GRIVCPT 310
                                         .:.::.:.:|.:.:......|   .||| |...|..
  Fly   389 NAIINGNVSSEFFRCLRPNRNVPMDPKIYRRISFRIAISRYRSSKGDRMP---RDLFDGYTNCIL 450

  Fly   311 LAMTLLLIILVTWLVFRQLRCLTRLKNSRPARIVP---HLLTLLLLTTCSAQLLSLLIFPPYHVR 372
            |..::||.:           .|.|:..:.|.|::.   .:..:||:.|..|...::|..|...|.
  Fly   451 LTYSMLLYV-----------ALPRMPRNWPLRVLTGWYWIYCILLVATYRASFTAILANPAARVT 504

  Fly   373 IASFEDLLR-------------------GDQ--KILGMRNEFYNFDGAFRARYAG---VFYLIDD 413
            |.:.|||||                   .|:  :.:|.:.|.:.:.....:|.|.   .:|    
  Fly   505 IDTLEDLLRSHIPPSTGATENRQFFLEANDEVARKVGEKMEVFGYSDDLTSRIAKGQCAYY---- 565

  Fly   414 PNELYDLRN-----------HFNTTWAYTMPYIKWLVIKTQQRHFSKP--------------LFR 453
            .||.| ||.           |........||    :|:..::....||              :.:
  Fly   566 DNEFY-LRYLRVADESGSALHIMKECVLYMP----VVLAMEKNSALKPRVDASIQHLAEGGLIAK 625

  Fly   454 WSKDLCFFDFMPTSVIVAPDSI-----YWES 479
            |.||.  .:.:|...:...:::     :|.|
  Fly   626 WLKDA--IEHLPAEALAQQEALMNIQKFWSS 654

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Ir20aNP_608456.1 None
Ir68aNP_648455.2 Lig_chan 429..661 CDD:278489 49/251 (20%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - P PTHR42643
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
11.100

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