DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Ir20a and Ir52d

DIOPT Version :9

Sequence 1:NP_608456.1 Gene:Ir20a / 33126 FlyBaseID:FBgn0031181 Length:563 Species:Drosophila melanogaster
Sequence 2:NP_611042.2 Gene:Ir52d / 36716 FlyBaseID:FBgn0050464 Length:594 Species:Drosophila melanogaster


Alignment Length:605 Identity:131/605 - (21%)
Similarity:267/605 - (44%) Gaps:105/605 - (17%)


- Green bases have known domain annotations that are detailed below.


  Fly     3 ASLNRSTGLSAELLDLYGLVVHFLLSGE---HTTLVYFNPAGLDCSWGVLWQRNLTAHPQIVWQR 64
            |:....|.|...||.|.     ..|..|   :|.|:|    |.||::..| .|.|.....:|...
  Fly    21 ATNTNHTDLEERLLSLL-----LRLQQEQFFNTLLIY----GEDCAFSSL-SRRLQVPTILVSSG 75

  Fly    65 NYSYPDLYYQFNAKLLVLACLPMDSRAAIQLEILANSLSHLRTVVRL-----LIEVAG---PDQV 121
            :.|:.   :.:::..|:|.|           |..|....:.:|:.:|     ||.:.|   ||.|
  Fly    76 STSFE---WNYSSLALILTC-----------EFKAEREENYQTLKKLQMNRRLILLNGNIKPDSV 126

  Fly   122 TLARQYLSFCLRRSMLHVELYFRDYHHSLILYSFRAFP--SFELVMRWISVGQGVKLFLHKLDDL 184
                  ..|..::...::.:...::|...|:|:.|.|.  ::|.|.    :.:|..:::.:..::
  Fly   127 ------CDFYSKKDQYNIAMVNNNFHQVGIIYACRLFQERNYEKVY----LSEGNPIYVDQFRNM 181

  Fly   185 RGHRLRVIPDLSPPNTFFYRDAR-GDNQVTGYLWDFLATFAGRLNAGLEVVRPSWRAGSASDSSY 248
            :|..|:.|.....|.:..|||.: |..:..||:.:.|..|..::||.|::.....:||..:....
  Fly   182 QGALLKSITFNLIPGSMAYRDPKTGQEKHIGYVANLLNNFVEKVNATLDMQVKLHKAGKKTSFYN 246

  Fly   249 MLEYSAKGLIDVGLTTTLITKWNLWAIHQYTYPLLVSSWCTMLPVEKPLATPDLFGRIVCPTLAM 313
            :.:::::.|:|:|:  :....:.:......:||.|::|.|.|:|:...:...:::..||.|.:.:
  Fly   247 ITKWASEDLVDIGM--SYAAYFEMTNFDTISYPYLMTSTCFMVPLPDMMPNSEIYMGIVDPPVLV 309

  Fly   314 TLLLI-----ILVTWLVFRQLRCLTRL---------------------KNSRPARIVPHLL---T 349
            .|:.|     :::.::..|..|.|:.:                     :::|..:::..|:   :
  Fly   310 VLIAIFCIFSVMLNYIKQRSWRSLSLVNVLLNDICLRGFLAQPFPFPRQSNRKLKLISMLVCFFS 374

  Fly   350 LLLLTTCSAQLLSLLIFPPYHVRIASFEDLLRGDQKILGMRNEFYNFDGAFRARYAGVFYLI--D 412
            ::..|..::.|.|.:..||...::.||.||.....|:...|   |:.: ..|.....:.:::  |
  Fly   375 VITTTMYTSYLQSFMWGPPIDPKMCSFADLENSRYKLAIRR---YDIE-MLRPFNVSMDHVVVFD 435

  Fly   413 DPNELYDLRNHFNTTWAYTMPYIKWLVIKTQQRHFSKPLFRWSKDLC-----FFDF-----MPTS 467
            :.::|..||:.|:..:.|.|..:.|...|.||:.|:.|||.:|:.||     ||.|     :|  
  Fly   436 ESSQLEYLRDSFDDNYMYPMSALSWSAFKEQQKLFAFPLFYYSEKLCLKPISFFSFPIRRHLP-- 498

  Fly   468 VIVAPDSIYWESIKDFTFRIHQAGLMKHWIRKSFYDMIKAGKMSIKDYSDLETLKPLNIGDLEIV 532
                    |.:..::...:.::.||..:||.:||.||::....::.|:|.......:.:.||..|
  Fly   499 --------YRDLFEEHMLQQNEFGLSTYWIDRSFSDMVRLKLATMNDFSPPRLEDYIEVSDLSWV 555

  Fly   533 WRVCGAAIAVASAIFIMELL 552
            :.:....:.::...|.:|||
  Fly   556 FGMYFTGLGISCCCFGLELL 575



Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 1 1.000 - - FOG0001038
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - P PTHR42643
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
33.010

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