DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Ir20a and Ir11a

DIOPT Version :9

Sequence 1:NP_608456.1 Gene:Ir20a / 33126 FlyBaseID:FBgn0031181 Length:563 Species:Drosophila melanogaster
Sequence 2:NP_572795.2 Gene:Ir11a / 32189 FlyBaseID:FBgn0030385 Length:642 Species:Drosophila melanogaster


Alignment Length:501 Identity:105/501 - (20%)
Similarity:174/501 - (34%) Gaps:169/501 - (33%)


- Green bases have known domain annotations that are detailed below.


  Fly   153 YSFRAF-----PSFELVMRWISVGQGVKLFLHKLDDLRGHRLRVIPDL----------------- 195
            ||::.|     |.       |:|.|     ::..|.:.|...:.:|||                 
  Fly   193 YSYKLFKANCTPG-------ITVRQ-----INHFDRITGKPQQSMPDLYPVRNGHLGDCPFNVGA 245

  Fly   196 --SPPNTFF--YRDARGDNQVT-------GYLWDFLATFAGRLNAGLEVVRPS-----WRAGSAS 244
              .||:..:  ::|....:.|:       |..||.|...|..|...:::..|.     :..|:.|
  Fly   246 AHMPPHLIYKRHKDPPPASNVSIPAEDLAGIDWDLLQLLAKALKFRIQLYMPQEPSQIFGEGNVS 310

  Fly   245 DSSYMLEYSAKGLIDV---GLT-----TTLITKWNLWAIHQYTYPLLV--SSWCTMLPVEKPLAT 299
            .....|   |.|.:.:   ||:     .:|.:|..::  ||..:.::|  ..:...|   .||..
  Fly   311 GCFRQL---ADGTVSIAIGGLSGSDKRRSLFSKSTVY--HQSNFVMVVRRDRYLGRL---GPLIL 367

  Fly   300 P---DLFGRIVCPTLAMTLLLIILVT-WLVFRQLRCLTRLKNSRPAR----------IVPH---- 346
            |   .|:|.|:     :.|||.:|.| ||       .:||..|.|..          |..|    
  Fly   368 PFRGKLWGVII-----VILLLAVLSTCWL-------RSRLGLSHPIEDLLTVIVGNPIPDHRLPG 420

  Fly   347 ------------LLTLLLLTTCSAQLLSLLIFPPYHVRIASFEDLLRGDQKILGMRNEFYNF--- 396
                        ||||:|.....|:|..:|....:.........|::.:..::.  |.:::|   
  Fly   421 KGFLRYLLASWMLLTLVLRCAYQARLFDVLRLSRHRPLPKDLSGLIKDNYTMVA--NGYHDFYPL 483

  Fly   397 --------DGAFRARYAGVFYLIDD---------PNELYDLRNHFN---TTWAYTMPYIKWLVIK 441
                    |  |.||:..|.....|         .|..|....|.|   .|:.....|:..|||.
  Fly   484 ELTCRQPLD--FSARFERVQRAAPDERLTTIALISNLAYWNHKHPNISRLTFVRQPIYMYHLVIY 546

  Fly   442 TQQRHFSKPLFRWSKDLCFFDFMPTSVIVAPDSIYWESIKDFTFRIHQAGLMKHWIRKSFYDMIK 506
            ..:|.|.:|                    |.|    ..||    ::..||:|.| |.:.:.....
  Fly   547 FPRRFFLRP--------------------AID----RKIK----QLLSAGVMAH-IERRYMQYEN 582

  Fly   507 AGKMSIKDYSDLETLKPLNIGDLEIVWRVCGAAIAVASAIFIMELL 552
            ..|::   .:|...|:.:....:...:|:.|..|.:|:.:||:|||
  Fly   583 KRKVA---SNDPVLLRRITKSIMNGAYRIHGLVIVLATGMFILELL 625

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Ir20aNP_608456.1 None
Ir11aNP_572795.2 Periplasmic_Binding_Protein_Type_2 306..>356 CDD:304360 12/54 (22%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - P PTHR42643
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
11.100

Return to query results.
Submit another query.