DRSC/TRiP Functional Genomics Resources

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Protein Alignment Ir20a and Ir67c

DIOPT Version :9

Sequence 1:NP_608456.1 Gene:Ir20a / 33126 FlyBaseID:FBgn0031181 Length:563 Species:Drosophila melanogaster
Sequence 2:NP_729609.1 Gene:Ir67c / 317838 FlyBaseID:FBgn0052058 Length:573 Species:Drosophila melanogaster


Alignment Length:537 Identity:120/537 - (22%)
Similarity:211/537 - (39%) Gaps:93/537 - (17%)


- Green bases have known domain annotations that are detailed below.


  Fly    74 QFNAKLLVLACLPMDSRAAIQLEILANSLSHLRTVVRLLIEVAGPDQVTLARQYLSFCLRRSMLH 138
            :|::..|::||. .||.....|..:...|..|:.:..|.:..:..|      .|....||...:|
  Fly    71 RFSSHSLIIACF-KDSTRNRTLNGVKELLWGLQYLPILFVVDSNMD------FYFQQALRHGFIH 128

  Fly   139 V-ELYFRDYHHSLILYSFRAFPSFELVMRWISVGQGVKLF-LHKLDDLRGHRLRVIPDLSPPNTF 201
            | .|.|.:..    ||:::.:|..|:    ..:....|.: |.||.:|:|..:|...:...|..|
  Fly   129 VLALNFMNGS----LYTYKPYPKVEV----HQIKDMQKFYKLTKLRNLQGQAVRTTVETMTPRCF 185

  Fly   202 FYRDARGDNQVTGYLWDFLATFAGRLNAGLEVVRPSWRAGSASDSSYMLEYSA--KGLIDVGLTT 264
            .||:..|.....||::..:..|....|...|.|     .|:.....|....:|  .|.||:....
  Fly   186 RYRNRHGQLVYAGYMYRMVKEFISTYNGTEEHV-----FGNVDTVPYKEGLAALKNGEIDMMPRI 245

  Fly   265 TLITKWN-------LWAIHQYTYPLLVSSWCTMLPVEKPLATPDLFGRIVCPTLAMTLLLI-ILV 321
            ....:|.       |:.|..|    ::..|...||  |.|.....|...|..|:.::.:.. |::
  Fly   246 IHALEWYYFYRSHILYNIKTY----IMVPWAEPLP--KSLYFIQPFRGTVWITIMVSFVYASIVI 304

  Fly   322 TWLVFRQ-------------LRCLTRLKNSR-----------PARIVPHLLTLLLLTTCSAQLLS 362
            .|:.:||             |:.|.:|..|:           .:.||..:...:|....:|||.|
  Fly   305 WWIRYRQQGNSSLTQSFMDVLQLLFQLPLSKIWHFNMGTHQVVSFIVLFVFGFMLTNLYTAQLSS 369

  Fly   363 LLIFPPYHVRIASFEDLLRGDQKILGMRNEFYNFDG----------AFRARYAGVFYLIDDPNEL 417
            .|....:..:|.:|:||.|..:.:|     ..:||.          ..:..:..:. ||....|:
  Fly   370 YLTTGLFKSQINTFDDLFREKRTLL-----VESFDAEVLHNMTKEKIIQKEFESII-LITSIEEV 428

  Fly   418 YDLRNHFNTTWAYTMPYIKWLVIKTQQRHFSKPLFRWSKDLCFFDFMPTSVIVAPDSIYWESIKD 482
            :..|...||::||.....:.....:|||:...|:|:..|::  :|..|..|.:.....|.|...:
  Fly   429 FKHRKSLNTSYAYEAYEDRIAFELSQQRYLRVPIFKILKEV--YDQRPVFVALRHGLPYVELFNN 491

  Fly   483 FTFRIHQAGLMKHWIR---KSFYDMIKAGKMSIKDYSDLETLKPLNIGDLE---IVWRVCGAAIA 541
            :..||.::|:   ||:   .||.:.|.:|::|.:.....|    :.|.|.:   ..:.:.|....
  Fly   492 YLRRIFESGI---WIKLQEDSFLEGIASGEISFRKSKSRE----IKIFDKDFYFFAYILLGMGWC 549

  Fly   542 VASAIFIMELLYFYINV 558
            |::....:||..|..:|
  Fly   550 VSTIALFLELWSFKYSV 566

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Ir20aNP_608456.1 None
Ir67cNP_729609.1 Lig_chan 288..500 CDD:278489 47/219 (21%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 1 1.000 - - FOG0001038
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - P PTHR42643
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
33.010

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