DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Ir20a and Ir52c

DIOPT Version :9

Sequence 1:NP_608456.1 Gene:Ir20a / 33126 FlyBaseID:FBgn0031181 Length:563 Species:Drosophila melanogaster
Sequence 2:NP_725470.1 Gene:Ir52c / 246630 FlyBaseID:FBgn0050468 Length:599 Species:Drosophila melanogaster


Alignment Length:606 Identity:131/606 - (21%)
Similarity:263/606 - (43%) Gaps:111/606 - (18%)


- Green bases have known domain annotations that are detailed below.


  Fly    12 SAELLD------------LYGLVVHFLLSGEHTTLVYFNPAGLDCSWGVLWQRNLTAHPQIVWQR 64
            |:::||            |:||:....:...:.||:.:   |.||:...|::| |.....:|...
  Fly    15 SSQILDVTNNSHLDFDYRLFGLLQRLQVEKSYDTLLVY---GEDCAIPSLFER-LQVPAVLVSSG 75

  Fly    65 NYSYPDLYYQFNAKLLVLACLPMDSRAAIQLEILANSLSHLRTVVRLLIEVAG---PDQVTLARQ 126
            :.::.   :.|::..|:|:|...|.|     |....:|..|:|..||:: :.|   |:.|     
  Fly    76 STNFD---WNFSSLTLILSCNFQDER-----EENYRTLMKLQTSRRLIL-LKGHIKPESV----- 126

  Fly   127 YLSFCLRRSMLHVELYFRDYHHSLILYSFRAF--PSFELVMRWISVGQGVKLFLHKLDDLRGHRL 189
             ..|..::...:|.:...:::...::||.|.|  .::|.    :::..|..::..:..::.|..:
  Fly   127 -CDFYSKKEQHNVAMVKENFYQLEVVYSCRLFQDQNYEK----LNLFDGKSIYKDQFRNMHGAPI 186

  Fly   190 RVIPDLSPPNTFFYRDAR-GDNQVTGYLWDFLATFAGRLNAGLEVVRPSWRAGSASDSSYMLEYS 253
            |.:.|..||.|..|.|:: |:.:..||:...::.|..::||.:::.....:.........:..::
  Fly   187 RTLSDKEPPRTIPYIDSKTGEEKFKGYVGMLISQFVKKVNATMQIREDLIKDDEEVSFVDITNFT 251

  Fly   254 AKGLIDVGL-TTTLITKWNLWAIHQYTYPLLVSSWCTMLPVEKPLATPDLFGRIVCPTLAMTLLL 317
            :..::|:|: ....:...|..||   :||.|:||:|.|.|:...|...|::..||.|::.:..|:
  Fly   252 SNDILDIGICEARTLEMSNYDAI---SYPYLMSSYCFMAPLPDSLPFSDVYMAIVAPSILIMFLI 313

  Fly   318 I-----ILVTWLVFRQLRCLT---RLKN--------SRP---ARIVPHLLTLLLLTTCSAQLLSL 363
            |     :|:.::..|..|.||   .|.|        ::|   .|.....|.|:.:..|.:.|:|.
  Fly   314 IFCICSVLIIYIQERSYRSLTIRSVLMNDICLRGFLAQPFPFPRQYNRKLKLIFMLVCFSSLIST 378

  Fly   364 LIF----------PPYHVRIASFEDLLRGDQKILGMRNEFYNFDGAFRARYAGVFYLID------ 412
            .::          ||...|:.||:|:.                    ::||.....:.:      
  Fly   379 TMYTAYLQAFLWGPPIEPRLTSFDDVK--------------------KSRYTMAINIYEREFLEA 423

  Fly   413 -----DPNELYD------LRNHFNTTWAYTMPYIKWLVIKTQQRHFSKPLFRWSKDLCFFDFMPT 466
                 :..|:||      ||:.|||.:.:.:..::|..|..:|:.|...:|.:....|...|...
  Fly   424 LNVSLEDVEIYDYGKFSKLRSTFNTNYLFPVTALQWFTINEEQKLFKYKIFYYCDAFCLNQFDIL 488

  Fly   467 SVIVAPDSIYWESIKDFTFRIHQAGLMKHWIRKSFYDMIKAGKMSIKDYSDLETLKPLNIGDLEI 531
            |:.:.....|.:..::......:.||.|:||.:|:.|||:|...:.||:|.|.....:.:.:|..
  Fly   489 SIPLRRHLPYRDIFEEHMLLQKEFGLTKYWIDQSYRDMIRANLTTFKDFSPLLENDYIEVHNLYW 553

  Fly   532 VWRVCGAAIAVASAIFIMELL 552
            |:.:....:.:....||:|:|
  Fly   554 VFTMYFVGMGMGLCFFILEIL 574



Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 1 1.000 - - FOG0001038
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - P PTHR42643
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
33.010

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