DRSC/TRiP Functional Genomics Resources

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Protein Alignment DIP-beta and mxra5b

DIOPT Version :10

Sequence 1:NP_001138225.1 Gene:DIP-beta / 33125 FlyBaseID:FBgn0259245 Length:555 Species:Drosophila melanogaster
Sequence 2:XP_068079803.1 Gene:mxra5b / 795448 ZFINID:ZDB-GENE-081104-119 Length:2548 Species:Danio rerio


Alignment Length:690 Identity:137/690 - (19%)
Similarity:220/690 - (31%) Gaps:261/690 - (37%)


- Green bases have known domain annotations that are detailed below.


  Fly     2 MNLLVVKESGERIADISCSQEHTT--KFSPKLSQVAKHRKLAQLEIASGSGLVGLGTGTGTGSGC 64
            :||.|.:.||.  |.|..:..|:|  .:..:||....         ||||..             
Zfish  1856 VNLQVKRNSGS--ARILSTSAHSTDVHYGDQLSLNCS---------ASGSPT------------- 1896

  Fly    65 GPAIRWQLLLLLLLGNCIDLTVSNKISSVGAFEPDFVIPLENVTIAQGRDATFTCVVNNLGG--- 126
             |.|.|:.....|:.:........|:.|.|.        |...::.:..:..:.|...|..|   
Zfish  1897 -PRIIWRTPAKKLVDSYYSFDRRMKVLSNGT--------LTITSVTEQDEGEYLCAARNNAGDDY 1952

  Fly   127 ---------------------HRVSGDG--------SSAP-AKVAWIKADAKAILAIHEHVITNN 161
                                 |:|...|        |..| .:|:|...|...|     :.:.::
Zfish  1953 VLLKVTVMMKAAKIDHKSLSEHKVLYGGELKVDCIASGLPNPEVSWSLPDGTMI-----NSVLSS 2012

  Fly   162 DRLSVQHNDY---NTWTLNIRGVKMEDAGKYMC----QVNTDPMKMQTATLEVVIPPDIINEETS 219
            |:.:::...|   :..||.:..|.|::.|.|.|    |:..|.||:.   ::|:....:|.....
Zfish  2013 DKNTIRAKRYVMFDNGTLYLNEVGMKEEGDYTCYAKNQMGKDEMKVH---IKVLADAPVIRNNAY 2074

  Fly   220 GDMMVPEGGSAKLVCRARGHPKPKITWRREDGREIIARNGSHQ----------KTK--------- 265
            ..:.|..|.:|.|.|.|:|.|.|.|||...|.:.|:.....:|          ||:         
Zfish  2075 SVIKVTYGETAILNCSAKGEPTPVITWISPDKKVIVPMTNKYQISNDGTLHIHKTQKINSGNYTC 2139

  Fly   266 -AQSVEG--------EMLTLSKI--------------TRSEMGAYMCIASNGVP----------- 296
             |:||.|        |:|....:              .|.:...:.|.| ||.|           
Zfish  2140 MARSVVGIDRKVVLVEVLVFPPVINGFEHPGIIRKTAVRDQRVLFDCKA-NGNPFPRIIWLFPNN 2203

  Fly   297 -----P------TVSKRMKLQVH----------------------FHPLVQVPN-----QLVGAP 323
                 |      ||.:...|.:|                      .|..::|..     ||..:|
Zfish  2204 VVLPAPYYGSRITVHRNGTLDIHAVRMSDSVELICIARNEFGETKLHVKLEVTEDIIKPQLRNSP 2268

  Fly   324 VLTD---------VTLICNVEASPKAINYWQRENGEMIIAGDRYALTEKENNMYAIEMILHIKRL 379
              ||         .||.|::|.:|.....|...||..:..|..::.....:     :..|.||..
Zfish  2269 --TDSIQLTIGKPTTLNCSIEGNPAPQITWTLPNGTSLYQGTTFSRFHHRS-----DGALLIKEP 2326

  Fly   380 QSSDFGGYKCISKNSIGDTEGTIRLYEMERPGKKILRDDDLNEVSKNEVVQKDTRSEDGSRNLNG 444
            .|||.|.|:|:.:||.|..|..:.|....:|       :..|:.|....:            :||
Zfish  2327 SSSDAGLYRCVGRNSGGFVERNVTLVSNRKP-------EITNQYSSLLSI------------ING 2372

  Fly   445 R-LYKDRAPDQHP------------------ASGSDQLLGRGTMRL-------IGTF-------- 475
            . |:.|...|.||                  :||...:|..||:.:       .||:        
Zfish  2373 EDLHLDCVSDAHPPPKLTWTLPSGVVLSRAQSSGRHSVLNNGTLSIHRTSVYDRGTYRCQISNDH 2437

  Fly   476 ------LLALLVLFTALAEAGPT-----------TLSCRT 498
                  :..:::.:.....:||.           ||.||:
Zfish  2438 GSSSLSVSVIVIAYPPRITSGPAAVTYGRVGVALTLDCRS 2477

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
DIP-betaNP_001138225.1 Ig 98..209 CDD:472250 27/150 (18%)
Ig strand B 115..119 CDD:409353 0/3 (0%)
Ig strand C 139..143 CDD:409353 1/3 (33%)
Ig strand E 174..178 CDD:409353 2/3 (67%)
Ig strand F 188..193 CDD:409353 2/8 (25%)
Ig strand G 202..205 CDD:409353 0/2 (0%)
Ig 211..307 CDD:472250 34/159 (21%)
Ig strand B 230..234 CDD:409353 2/3 (67%)
Ig strand C 243..247 CDD:409353 2/3 (67%)
Ig strand E 272..276 CDD:409353 2/3 (67%)
Ig strand F 286..291 CDD:409353 1/4 (25%)
Ig strand G 300..303 CDD:409353 0/2 (0%)
IG_like 327..405 CDD:214653 23/86 (27%)
Ig strand B 328..332 CDD:409353 2/3 (67%)
Ig strand C 341..346 CDD:409353 1/4 (25%)
Ig strand E 365..376 CDD:409353 1/10 (10%)
Ig strand F 386..391 CDD:409353 2/4 (50%)
Ig strand G 399..402 CDD:409353 1/2 (50%)
mxra5bXP_068079803.1 leucine-rich repeat 33..51 CDD:275380
LRR <45..>213 CDD:443914
leucine-rich repeat 52..75 CDD:275380
leucine-rich repeat 76..99 CDD:275380
leucine-rich repeat 100..123 CDD:275380
leucine-rich repeat 124..147 CDD:275380
leucine-rich repeat 148..179 CDD:275380
leucine-rich repeat 180..203 CDD:275380
LRRCT 212..>258 CDD:214507
FR1 465..482 CDD:409355
Ig strand A' 470..472 CDD:409355
IG_like 472..552 CDD:214653
Ig strand B 475..483 CDD:409355
CDR1 483..489 CDD:409355
Ig strand D 512..517 CDD:409355
FR3 513..537 CDD:409355
Ig strand F 531..538 CDD:409355
CDR3 538..547 CDD:409355
Ig 573..639 CDD:472250
Ig strand B 576..580 CDD:409353
Ig strand C 589..593 CDD:409353
Ig strand E 615..619 CDD:409353
Ig strand F 629..634 CDD:409353
IG_like 1583..1666 CDD:214653
Ig strand B 1592..1596 CDD:143223
Ig strand C 1605..1609 CDD:143223
Ig strand E 1632..1636 CDD:143223
Ig strand F 1646..1651 CDD:143223
Ig 1679..1763 CDD:472250
Ig strand B 1689..1693 CDD:409353
Ig strand C 1702..1710 CDD:409353
Ig strand E 1729..1733 CDD:409353
Ig strand F 1743..1748 CDD:409353
Ig strand G 1756..1759 CDD:409353
Ig 1777..1860 CDD:472250 2/3 (67%)
Ig strand B 1786..1790 CDD:409353
Ig strand C 1799..1804 CDD:409353
Ig strand E 1826..1830 CDD:409353
Ig strand F 1840..1845 CDD:409353
Ig strand G 1853..1856 CDD:409353 137/690 (20%)
IG_like 1882..1959 CDD:214653 17/107 (16%)
Ig strand B 1885..1889 CDD:409353 2/3 (67%)
Ig strand C 1898..1902 CDD:409353 1/3 (33%)
Ig strand E 1925..1929 CDD:409353 2/11 (18%)
Ig strand F 1939..1944 CDD:409353 1/4 (25%)
Ig 1970..2062 CDD:472250 22/99 (22%)
Ig strand B 1982..1986 CDD:409353 0/3 (0%)
Ig strand C 1995..2004 CDD:409353 3/8 (38%)
Ig strand E 2028..2032 CDD:409353 2/3 (67%)
Ig strand F 2042..2047 CDD:409353 2/4 (50%)
Ig strand G 2055..2058 CDD:409353 1/2 (50%)
Ig 2075..2156 CDD:472250 21/80 (26%)
Ig strand B 2085..2089 CDD:409353 2/3 (67%)
Ig strand C 2098..2102 CDD:409353 2/3 (67%)
Ig strand E 2122..2126 CDD:409353 0/3 (0%)
Ig strand F 2136..2141 CDD:409353 0/4 (0%)
Ig 2175..2255 CDD:472250 12/80 (15%)
Ig strand B 2182..2186 CDD:409353 0/3 (0%)
Ig strand C 2195..2199 CDD:409353 0/3 (0%)
Ig strand E 2221..2225 CDD:409353 1/3 (33%)
Ig strand F 2235..2240 CDD:409353 0/4 (0%)
Ig strand G 2248..2251 CDD:409353 0/2 (0%)
Ig_3 2261..2340 CDD:464046 23/85 (27%)
Ig_3 2356..2435 CDD:464046 17/97 (18%)
Ig_3 2452..2534 CDD:464046 6/26 (23%)
Blue background indicates that the domain is not in the aligned region.

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