DRSC/TRiP Functional Genomics Resources

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Protein Alignment DIP-beta and opcml

DIOPT Version :10

Sequence 1:NP_001138225.1 Gene:DIP-beta / 33125 FlyBaseID:FBgn0259245 Length:555 Species:Drosophila melanogaster
Sequence 2:NP_001072487.1 Gene:opcml / 779942 XenbaseID:XB-GENE-5831850 Length:346 Species:Xenopus tropicalis


Alignment Length:332 Identity:96/332 - (28%)
Similarity:150/332 - (45%) Gaps:50/332 - (15%)


- Green bases have known domain annotations that are detailed below.


  Fly    84 LTVSNKISSVGAFEPDFVIP--LENVTIAQGRDATFTCVVNNLGGHRVSGDGSSAPAKVAWIKAD 146
            |||...|:.|.....|...|  ::|||:.||..|...|.|:|    ||:        :|||:  :
 Frog    22 LTVLLSITGVPVRSGDAGFPKAMDNVTVRQGDSAILRCTVDN----RVT--------RVAWL--N 72

  Fly   147 AKAILAIHEHVITNNDRLSVQ------HNDYNTWTLNIRGVKMEDAGKYMCQVNTD--PMKMQTA 203
            ...||      .|.||:.|:.      .|..:.:::.|:.|.:.|.|.|.|.|.||  | |....
 Frog    73 RSTIL------YTGNDKWSIDPRVVLLANTKSQYSIEIQNVDIYDEGPYTCSVQTDNHP-KTSRV 130

  Fly   204 TLEVVIPPDIINEETSGDMMVPEGGSAKLVCRARGHPKPKITWRREDGREIIARNGSHQKTKAQS 268
            .|.|.:.|.|:|  .|.|:.|.||.:..|.|.|.|.|:|.:|||...|:       ||:...   
 Frog   131 HLIVQVAPQILN--ISSDITVNEGSTVALRCLATGRPEPAVTWRHFTGK-------SHRFVS--- 183

  Fly   269 VEGEMLTLSKITRSEMGAYMCIASNGVPPTVSKRMKLQVHFHPLVQVPNQLVGAPVLTDVTLICN 333
             :.|.|.::.|||.:.|.|.|.|:|.|.....:::::.|::.|.:. ..:..||.:.....|.|:
 Frog   184 -DDEYLEITGITRDQSGQYECSAANDVSAPDIRKVRVTVNYPPYIS-DTRNTGASLGQKGILRCS 246

  Fly   334 VEASPKAINYWQRENGEMIIAGDRYALTEKENNMYAIEMILHIKRLQSSDFGGYKCISKNSIGDT 398
            ..|.|.|...|.||...:....|...:..|::     ..||....:...|:|.|.|::.|.:|::
 Frog   247 ASAVPLAEFQWYREETRLANGLDGVRIENKDH-----MSILTFFNVSEKDYGNYTCVASNKLGNS 306

  Fly   399 EGTIRLY 405
            ..::.||
 Frog   307 NASVILY 313

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
DIP-betaNP_001138225.1 Ig 98..209 CDD:472250 36/120 (30%)
Ig strand B 115..119 CDD:409353 1/3 (33%)
Ig strand C 139..143 CDD:409353 2/3 (67%)
Ig strand E 174..178 CDD:409353 0/3 (0%)
Ig strand F 188..193 CDD:409353 2/4 (50%)
Ig strand G 202..205 CDD:409353 0/2 (0%)
Ig 211..307 CDD:472250 31/95 (33%)
Ig strand B 230..234 CDD:409353 1/3 (33%)
Ig strand C 243..247 CDD:409353 1/3 (33%)
Ig strand E 272..276 CDD:409353 2/3 (67%)
Ig strand F 286..291 CDD:409353 2/4 (50%)
Ig strand G 300..303 CDD:409353 0/2 (0%)
IG_like 327..405 CDD:214653 18/77 (23%)
Ig strand B 328..332 CDD:409353 1/3 (33%)
Ig strand C 341..346 CDD:409353 1/4 (25%)
Ig strand E 365..376 CDD:409353 2/10 (20%)
Ig strand F 386..391 CDD:409353 2/4 (50%)
Ig strand G 399..402 CDD:409353 0/2 (0%)
opcmlNP_001072487.1 Ig 46..134 CDD:472250 33/108 (31%)
Ig strand B 55..59 CDD:409353 1/3 (33%)
Ig strand C 67..71 CDD:409353 2/3 (67%)
Ig strand E 100..104 CDD:409353 0/3 (0%)
Ig strand F 114..119 CDD:409353 2/4 (50%)
Ig strand G 127..130 CDD:409353 0/2 (0%)
Ig_3 138..207 CDD:464046 29/81 (36%)
Ig_3 224..301 CDD:464046 19/82 (23%)

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