DRSC/TRiP Functional Genomics Resources

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Protein Alignment DIP-beta and ntm

DIOPT Version :9

Sequence 1:NP_001138225.1 Gene:DIP-beta / 33125 FlyBaseID:FBgn0259245 Length:555 Species:Drosophila melanogaster
Sequence 2:XP_021334871.1 Gene:ntm / 678534 ZFINID:ZDB-GENE-060421-6020 Length:380 Species:Danio rerio


Alignment Length:431 Identity:104/431 - (24%)
Similarity:179/431 - (41%) Gaps:74/431 - (17%)


- Green bases have known domain annotations that are detailed below.


  Fly    63 GCGPAIRWQLLLLLLLGNCIDLTVSNKISSVGAFEPDFVIPLENVTIAQGRDATFTCVVNNLGGH 127
            ||     |:..:::.|.....|.....:.|.|..:.|.. .::|:||.||.....:|...:...|
Zfish     7 GC-----WRRCVVMGLRLLFLLPAGLPVRSQGESQSDNK-QMDNITIRQGETLFLSCSQGDFVTH 65

  Fly   128 RVSGDGSSAPAKVAWIKADAKAILAIHEHVITNNDRLSVQHNDYNTWTLNIRGVKMEDAGKYMCQ 192
                        .||:  :..:||...|...:.:.|:|:.......:|:.|..|.:.|.|:|:|.
Zfish    66 ------------TAWL--NRSSILYAGEDKWSVDPRVSLVTLSQEEFTIKIEDVDVTDEGQYICA 116

  Fly   193 VNTDPMKMQTATLEVV--IPPDIINEETSGDMMVPEGGSAKLVCRARGHPKPKITWRREDGREII 255
            |.|. .:.:|.::.::  :||.|:|  .|.|::|.||.:..|:|.|.|.|:|.|.||.:...:  
Zfish   117 VQTS-SRPRTTSVHIIVQVPPKIVN--LSRDLVVNEGSNVTLMCLANGKPEPAIVWRMKSPSD-- 176

  Fly   256 ARNGSHQKTKAQSVEGEMLTLSKITRSEMGAYMCIASNGVPPTVSKRMKLQVHFHPLVQVPNQLV 320
                     .:.|.:.|:|.:..|:|...|.|.|.|:|.: ...::.::|.|::.|.|. ..:.|
Zfish   177 ---------DSLSSDSEVLDIPFISRYRAGVYECTAANDI-AVDTQTVELTVNYAPSVS-DGRDV 230

  Fly   321 GAPVLTDVTLICNVEASPKAINYWQRE-----NG----EMIIAGDRYALTEKENNMYAIEMILHI 376
            |..:.....|.|..:|.|:|...|.|:     ||    |:..||....||              .
Zfish   231 GVTLGQRGVLQCEADAVPEADFEWYRDDRRIFNGLDGIEIEAAGALSRLT--------------F 281

  Fly   377 KRLQSSDFGGYKCISKNSIGDTEGTIRLYEMERPGKKILRDDDLNEVSKNEVVQKDTRSEDGSRN 441
            ..:..:|:|.|.|::.|.:|....:..|||:..|     ....|.:|..:..|.:.|.|:.....
Zfish   282 FNVSEADYGNYTCVAINKLGSANTSFVLYEIIEP-----TSSTLLQVETSPSVLEMTSSDLEQTP 341

  Fly   442 LNGRLYKDRAPDQHPASGSDQLLGRGTMRLIGTFLLALLVL 482
            |...|::        ..|:.|....||..:...|.|.:.:|
Zfish   342 LQNDLWE--------GPGAVQDGNSGTSTVFNPFCLLIAIL 374

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
DIP-betaNP_001138225.1 I-set 98..209 CDD:254352 25/112 (22%)
ig 102..195 CDD:278476 22/92 (24%)
IG_like 219..307 CDD:214653 25/87 (29%)
Ig 221..307 CDD:299845 24/85 (28%)
Ig 311..404 CDD:299845 24/101 (24%)
IG_like 327..405 CDD:214653 20/86 (23%)
ntmXP_021334871.1 Ig 44..132 CDD:325142 24/102 (24%)
Ig_3 135..205 CDD:316449 27/82 (33%)
I-set 228..309 CDD:333254 22/94 (23%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C170576287
Domainoid 1 1.000 64 1.000 Domainoid score I10104
eggNOG 00.000 Not matched by this tool.
Hieranoid 1 1.000 - -
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 128 1.000 Inparanoid score I4644
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D265311at33208
OrthoFinder 1 1.000 - - FOG0000150
OrthoInspector 1 1.000 - - otm26286
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X97
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
98.900

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