DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment DIP-beta and ntm

DIOPT Version :10

Sequence 1:NP_001138225.1 Gene:DIP-beta / 33125 FlyBaseID:FBgn0259245 Length:555 Species:Drosophila melanogaster
Sequence 2:NP_001003852.2 Gene:ntm / 678534 ZFINID:ZDB-GENE-060421-6020 Length:375 Species:Danio rerio


Alignment Length:423 Identity:104/423 - (24%)
Similarity:179/423 - (42%) Gaps:70/423 - (16%)


- Green bases have known domain annotations that are detailed below.


  Fly    72 LLLLLLLGNCIDLTVSN-KISSVGAFEPDFVIPLENVTIAQGRDATFTCVVNNLGGHRVSGDGSS 135
            :|.::|:|..|.|.... .:.|.|..:.|.. .::|:||.||.....:|...:...|        
Zfish     5 VLWVVLIGISIALIQQGLPVRSQGESQSDNK-QMDNITIRQGETLFLSCSQGDFVTH-------- 60

  Fly   136 APAKVAWIKADAKAILAIHEHVITNNDRLSVQHNDYNTWTLNIRGVKMEDAGKYMCQVNTDPMKM 200
                .||:  :..:||...|...:.:.|:|:.......:|:.|..|.:.|.|:|:|.|.|. .:.
Zfish    61 ----TAWL--NRSSILYAGEDKWSVDPRVSLVTLSQEEFTIKIEDVDVTDEGQYICAVQTS-SRP 118

  Fly   201 QTATLEVV--IPPDIINEETSGDMMVPEGGSAKLVCRARGHPKPKITWRREDGREIIARNGSHQK 263
            :|.::.::  :||.|:|  .|.|::|.||.:..|:|.|.|.|:|.|.||.:...:          
Zfish   119 RTTSVHIIVQVPPKIVN--LSRDLVVNEGSNVTLMCLANGKPEPAIVWRMKSPSD---------- 171

  Fly   264 TKAQSVEGEMLTLSKITRSEMGAYMCIASNGVPPTVSKRMKLQVHFHPLVQVPNQLVGAPVLTDV 328
             .:.|.:.|:|.:..|:|...|.|.|.|:|.: ...::.::|.|::.|.|. ..:.||..:....
Zfish   172 -DSLSSDSEVLDIPFISRYRAGVYECTAANDI-AVDTQTVELTVNYAPSVS-DGRDVGVTLGQRG 233

  Fly   329 TLICNVEASPKAINYWQRE-----NG----EMIIAGDRYALTEKENNMYAIEMILHIKRLQSSDF 384
            .|.|..:|.|:|...|.|:     ||    |:..||....||              ...:..:|:
Zfish   234 VLQCEADAVPEADFEWYRDDRRIFNGLDGIEIEAAGALSRLT--------------FFNVSEADY 284

  Fly   385 GGYKCISKNSIGDTEGTIRLYEMERPGKKILRDDDLNEVSKNEVVQKDTRSEDGSRNLNGRLYKD 449
            |.|.|::.|.:|....:..|||:..|     ....|.:|..:..|.:.|.|:.....|...|:: 
Zfish   285 GNYTCVAINKLGSANTSFVLYEIIEP-----TSSTLLQVETSPSVLEMTSSDLEQTPLQNDLWE- 343

  Fly   450 RAPDQHPASGSDQLLGRGTMRLIGTFLLALLVL 482
                   ..|:.|....||..:...|.|.:.:|
Zfish   344 -------GPGAVQDGNSGTSTVFNPFCLLIAIL 369

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
DIP-betaNP_001138225.1 Ig 98..209 CDD:472250 25/112 (22%)
Ig strand B 115..119 CDD:409353 0/3 (0%)
Ig strand C 139..143 CDD:409353 1/3 (33%)
Ig strand E 174..178 CDD:409353 1/3 (33%)
Ig strand F 188..193 CDD:409353 2/4 (50%)
Ig strand G 202..205 CDD:409353 1/2 (50%)
Ig 211..307 CDD:472250 28/95 (29%)
Ig strand B 230..234 CDD:409353 1/3 (33%)
Ig strand C 243..247 CDD:409353 1/3 (33%)
Ig strand E 272..276 CDD:409353 2/3 (67%)
Ig strand F 286..291 CDD:409353 2/4 (50%)
Ig strand G 300..303 CDD:409353 0/2 (0%)
IG_like 327..405 CDD:214653 20/86 (23%)
Ig strand B 328..332 CDD:409353 1/3 (33%)
Ig strand C 341..346 CDD:409353 1/4 (25%)
Ig strand E 365..376 CDD:409353 0/10 (0%)
Ig strand F 386..391 CDD:409353 2/4 (50%)
Ig strand G 399..402 CDD:409353 0/2 (0%)
ntmNP_001003852.2 Ig 39..127 CDD:472250 24/102 (24%)
Ig strand B 48..52 CDD:409353 0/3 (0%)
Ig strand C 60..64 CDD:409353 2/15 (13%)
Ig strand E 93..97 CDD:409353 1/3 (33%)
Ig strand F 107..112 CDD:409353 2/4 (50%)
Ig strand G 120..123 CDD:409353 1/2 (50%)
Ig_3 130..200 CDD:464046 27/82 (33%)
Ig 223..304 CDD:472250 22/94 (23%)
Ig strand B 233..237 CDD:409353 1/3 (33%)
Ig strand C 246..250 CDD:409353 0/3 (0%)
Ig strand E 272..276 CDD:409353 2/17 (12%)
Ig strand F 286..291 CDD:409353 2/4 (50%)

Return to query results.
Submit another query.