DRSC/TRiP Functional Genomics Resources

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Protein Alignment DIP-beta and igsf9ba

DIOPT Version :9

Sequence 1:NP_001138225.1 Gene:DIP-beta / 33125 FlyBaseID:FBgn0259245 Length:555 Species:Drosophila melanogaster
Sequence 2:XP_009289969.2 Gene:igsf9ba / 567389 ZFINID:ZDB-GENE-060503-729 Length:1475 Species:Danio rerio


Alignment Length:532 Identity:117/532 - (21%)
Similarity:178/532 - (33%) Gaps:166/532 - (31%)


- Green bases have known domain annotations that are detailed below.


  Fly    97 EPDFVIPLENVTIAQGRDATFTCVVNNLGGHRVSGDGSSAPAKVAWIKADAKAILAIHEHVITNN 161
            ||.|      ||...|......|.|:    |.:  :|...|..|.|.|........|       |
Zfish    29 EPQF------VTARAGESVVLGCDVS----HPL--NGQQTPYVVEWFKFGVPIPFFI-------N 74

  Fly   162 DRLSVQHND---------YNTWTLNIRGVKMEDAGKYMCQ--------------------VNTDP 197
            .|....|.|         :...:|.|..|:.||.|.|.|:                    ||..|
Zfish    75 FRFYPPHVDPEYAGRASLHGKASLQIEQVRSEDQGWYECRVLMLEQQYDTFHNGSWVHLTVNAPP 139

  Fly   198 MKMQTATLEVVIPPDIINEETSGDMMVPEGGSAKLVCRARGHPKPKITWRREDGREIIARNGSHQ 262
            ....|       ||..:...        ||||..|.|.|.|:|||.:||.|| |.::.:      
Zfish   140 TFSDT-------PPQYVEAR--------EGGSITLTCTAFGNPKPVVTWLRE-GDQLTS------ 182

  Fly   263 KTKAQSVEGEMLTLSKITRSEMGAYMCIASNGVPPTVSKRMKLQVHFHPLVQVPNQLVGAPVLTD 327
             |:..:|....||:..|||.:.|||.|.|.:.....: ...:|.|...|.:..|.:.:...:..:
Zfish   183 -TRKYTVSDGSLTVQAITREDRGAYSCRAHSDQGEAL-HTTRLLVQGPPYIVTPPENITVNISQN 245

  Fly   328 VTLICNVEASPKAINY-WQRENGEMIIAGDRYALTEKENNMY-----------AIEMILHIKRLQ 380
            ....|..||.|..:.| |..|                |:|:|           .|:..|.|.|::
Zfish   246 AQFTCQAEAYPGNLTYTWYWE----------------EDNVYFKNDLKLRVRIFIDGTLIIYRVK 294

  Fly   381 SSDFGGYKCISKNSIGDTEGTIRLYEMERPGKKILRDDDLNEVSKNEVVQKDTRSEDGSRNLNG- 444
            ..|.|.|.|...||:|.:........::.|.:         .|:...|:..       .|.|:| 
Zfish   295 PEDAGKYTCSPSNSLGISPSASAYLTVQYPAR---------VVNMPPVIYV-------PRKLSGI 343

  Fly   445 --------------RLYKDRAP---DQHPASGSDQLLGRGTMRL-------IGTFLLALLVLFTA 485
                          |..||..|   :::|  |..|:.. |::|:       :||:......:...
Zfish   344 IRCPVDANPPVTSVRWEKDGYPLRIEKYP--GWSQMTD-GSIRVAEVTEDSLGTYTCVPYNVLGT 405

  Fly   486 LAEAGPTTLSCR-------TKGG--RQKKAKETSWNGRRARDGREDGHAAEWRQCWERSALSWRR 541
            :.::.|.||..:       ..||  ||:..:|.......:.|.             |...:.||:
Zfish   406 MGQSPPATLVLKDPPYFNVRPGGEYRQEAGRELVIPCAASGDP-------------EIPTIQWRK 457

  Fly   542 SAPPELDYYSLI 553
            ...|....::|:
Zfish   458 VGKPSRSKHNLL 469

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
DIP-betaNP_001138225.1 I-set 98..209 CDD:254352 30/139 (22%)
ig 102..195 CDD:278476 25/121 (21%)
IG_like 219..307 CDD:214653 29/87 (33%)
Ig 221..307 CDD:299845 29/85 (34%)
Ig 311..404 CDD:299845 23/104 (22%)
IG_like 327..405 CDD:214653 21/89 (24%)
igsf9baXP_009289969.2 IG 30..115 CDD:214652 26/103 (25%)
I-set 139..225 CDD:254352 33/109 (30%)
I-set 229..321 CDD:333254 23/107 (21%)
Ig 345..415 CDD:325142 13/72 (18%)
Ig 438..503 CDD:319273 6/45 (13%)
FN3 511..606 CDD:238020
FN3 622..706 CDD:238020
Atrophin-1 <924..1361 CDD:331285
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG3510
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
21.810

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