DRSC/TRiP Functional Genomics Resources

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Protein Alignment DIP-beta and kirrel3l

DIOPT Version :9

Sequence 1:NP_001138225.1 Gene:DIP-beta / 33125 FlyBaseID:FBgn0259245 Length:555 Species:Drosophila melanogaster
Sequence 2:NP_001092814.2 Gene:kirrel3l / 557315 ZFINID:ZDB-GENE-070831-1 Length:755 Species:Danio rerio


Alignment Length:553 Identity:112/553 - (20%)
Similarity:172/553 - (31%) Gaps:197/553 - (35%)


- Green bases have known domain annotations that are detailed below.


  Fly    77 LLGNCIDLTVSNKISSVGAFEPDFVIPLENVTIAQGRDATFTCVVNN-------------LGGHR 128
            :|...|.|.:...:|....|...   |.:.|.:| |:..|..||:..             |||.|
Zfish     1 MLAFYIALCLLGTVSQAAYFSQQ---PQDQVVVA-GQSVTLPCVIVGYRGMVQWTKDGLALGGER 61

  Fly   129 VSGDGSSAPAKVAWIKADAKAILAIHEHVITNNDRLSVQHNDYNTWTLNIRGVKMEDAGKYMCQV 193
                  ..|   .|::....            .|.||.:|      :|.|...::.|...|.||.
Zfish    62 ------DLP---GWVRYSLM------------GDPLSGEH------SLVIDSAELGDDAIYECQA 99

  Fly   194 NTDPMKMQTATLEVVIPPDIINEETSGDMMVPEGGSA---------KLVCRARG-HPKPKITWRR 248
            ....::...|.|.|::||        .|.:| |||..         .|.|||.| .|..:|||.|
Zfish   100 TQAGLRSHRAKLTVLVPP--------SDPIV-EGGPVVRLKAHTPHNLTCRASGAKPAAEITWYR 155

  Fly   249 EDGREIIARNGSHQKTKAQSVEGE----MLTLSKITRSEMGAYMCIASNGVPPT---VSKRMKLQ 306
             ||.  |.:|..:.|:..:..:.|    ||.:..........|.|...|...|.   .|..:.:|
Zfish   156 -DGE--IMQNAIYSKSLMEDGKRETAVSMLPMVPEDSDSGRTYTCRVLNPAAPAGRQTSVTINVQ 217

  Fly   307 VHFHP-----LVQVPNQLVGAPVLTDVTLICNVEASPKAINYWQRENGEMIIAGDRYALTEKENN 366
               ||     .||....:.||.||    .||:..|:|:...|...:.|..|...:..:|....::
Zfish   218 ---HPPSVTLSVQPQTVMEGAKVL----FICSASANPEITGYRWSKGGVPISEANGDSLEVTADH 275

  Fly   367 MYAIEMILHIKRLQSSDFGGYKCISKNSIGDTE-GTI-------RLYEMERP------------- 410
            .|..:.:              .|...||:|.|. .|:       ||....:|             
Zfish   276 SYFTDPV--------------SCEVSNSVGSTNVSTLVDVQFGPRLLTEPKPQIVDIGMDAAFTC 326

  Fly   411 ---------------GKKILRDDDLNEVSKNEVVQKDT--------------------------- 433
                           |..::..:. |.:....|.|.||                           
Zfish   327 SWTGNPPLTLAWTKQGSNVVLSNS-NTLQLKAVTQDDTGTYTCKAIVPRIGVAERDVTLTVNGPP 390

  Fly   434 -----RSEDGSRNLNGRLY----KDRAPDQHPASGSDQLLGRGTMRLIGTF----------LLAL 479
                 .::...::..|:|.    ....||:...:..|.:|..|:.   |.|          :|:.
Zfish   391 IITAEATQQAIKHSKGKLECLVGSSPPPDKIVWTFGDMMLSSGSS---GRFSVQTVNSDQGVLSS 452

  Fly   480 LVLFTALAEAGPTTLSCRTKGGRQKKAKETSWN 512
            |:|...||:......:|            |:||
Zfish   453 LILSETLAQDFQLRYNC------------TAWN 473

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
DIP-betaNP_001138225.1 I-set 98..209 CDD:254352 26/123 (21%)
ig 102..195 CDD:278476 23/105 (22%)
IG_like 219..307 CDD:214653 28/104 (27%)
Ig 221..307 CDD:299845 28/102 (27%)
Ig 311..404 CDD:299845 22/105 (21%)
IG_like 327..405 CDD:214653 16/85 (19%)
kirrel3lNP_001092814.2 None


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
10.910

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