DRSC/TRiP Functional Genomics Resources

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Protein Alignment DIP-beta and cadm4

DIOPT Version :10

Sequence 1:NP_001138225.1 Gene:DIP-beta / 33125 FlyBaseID:FBgn0259245 Length:555 Species:Drosophila melanogaster
Sequence 2:XP_073781010.1 Gene:cadm4 / 492787 ZFINID:ZDB-GENE-041114-138 Length:425 Species:Danio rerio


Alignment Length:490 Identity:126/490 - (25%)
Similarity:193/490 - (39%) Gaps:104/490 - (21%)


- Green bases have known domain annotations that are detailed below.


  Fly    64 CG----PAIRWQLLLLLLLGNCIDLTVSNKIS--SVGAFEPDFVIPLENVTIAQGRDATFTCVVN 122
            ||    |||       :||.:.::|.:..:.|  ||.:......:..||||:.:|..|..:|.:.
Zfish     6 CGLHGEPAI-------VLLHSAVELAIKLQSSNLSVPSTSRGQAVQAENVTVLEGGTAQISCRLQ 63

  Fly   123 NLGGHRVSGDGSSAPAKVAWIKADAKAILAIHEHVITNNDRLSVQHNDYNTWTLNIRGVKMEDAG 187
            |.       |||     :..|:...:..|..:......:||..:.........:.:..|.:.|.|
Zfish    64 NY-------DGS-----IVVIQNPRRQTLFFNGTRALKDDRFQMVLFTPKLVRITLTNVSVSDEG 116

  Fly   188 KYMCQVNTDPMKMQTATLEVVIPPDIINEETSGDMMVPEGGSAKLVCRA-RGHPKPKITWRREDG 251
            .|.||:.||....|.|||.||:||::.:.|...:.:  |||..:|.|.: |..|...:.|.| |.
Zfish   117 GYFCQLYTDDTHHQVATLSVVVPPEVPSVEVKTEAV--EGGEVELTCLSLRSKPPATLRWVR-DR 178

  Fly   252 REIIARNGSHQKTKAQSVEGEMLTLSKITRSEMGAYMCIASNGVPPTVS-KRMK---LQVHFHPL 312
            |||.......:..|..|| ...:.:....:....|..|.||:  |..|| ||::   |.|||.|.
Zfish   179 REIPGVISQQENGKTVSV-SNTIRIPVERKDNRAALSCEASH--PALVSQKRVRHYSLDVHFAPT 240

  Fly   313 VQ-VPNQLVGAPVLTD---VTLICNVEASPKAIN-YWQRENGEMIIAGDRYALTEKENNMYAIEM 372
            |: ||.|    .:|.:   ::|.|:|..:|...: .|.|.|..:   .:|   .||..|      
Zfish   241 VKIVPPQ----GILREGDSLSLTCSVTGNPLPRDIQWSRVNDTL---PER---AEKTGN------ 289

  Fly   373 ILHIKRLQSSDFGGYKCISKNSIGDTEG--TIRLYEMERPGKKILRDDDLNEVSKNEVVQKDTRS 435
            |||:.||..|..|.|.|.:.|:.|....  |:.:|.........:...:|.              
Zfish   290 ILHMSRLSQSHNGTYLCQAHNNYGRAADHYTLLVYVSVAQSHPAIAHPNLP-------------- 340

  Fly   436 EDGSRNLNGRLYKD--RAPDQHPASGSDQLLGRGTMRLIGTFLLALLVLFTALAEAGPTT-LSCR 497
                   :.:.|:|  ...:.|.|.         ...:||. :||||| ||.:.....|. .|.|
Zfish   341 -------SSKEYQDPGAVVETHSAV---------PFAVIGG-ILALLV-FTVICVLIVTIWCSVR 387

  Fly   498 TKGG----------RQKKAKETSWNGRRARDGRED 522
            .||.          ...:.:|...||..|..|:::
Zfish   388 QKGSYLTHEASGLDEHGEVQEAFLNGNDASQGKKE 422

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
DIP-betaNP_001138225.1 Ig 98..209 CDD:472250 28/110 (25%)
Ig strand B 115..119 CDD:409353 1/3 (33%)
Ig strand C 139..143 CDD:409353 0/3 (0%)
Ig strand E 174..178 CDD:409353 0/3 (0%)
Ig strand F 188..193 CDD:409353 2/4 (50%)
Ig strand G 202..205 CDD:409353 1/2 (50%)
Ig 211..307 CDD:472250 28/100 (28%)
Ig strand B 230..234 CDD:409353 1/3 (33%)
Ig strand C 243..247 CDD:409353 0/3 (0%)
Ig strand E 272..276 CDD:409353 0/3 (0%)
Ig strand F 286..291 CDD:409353 2/4 (50%)
Ig strand G 300..303 CDD:409353 2/3 (67%)
IG_like 327..405 CDD:214653 23/83 (28%)
Ig strand B 328..332 CDD:409353 1/3 (33%)
Ig strand C 341..346 CDD:409353 1/5 (20%)
Ig strand E 365..376 CDD:409353 3/10 (30%)
Ig strand F 386..391 CDD:409353 2/4 (50%)
Ig strand G 399..402 CDD:409353 0/4 (0%)
cadm4XP_073781010.1 None

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