DRSC/TRiP Functional Genomics Resources

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Protein Alignment DIP-beta and opcml

DIOPT Version :9

Sequence 1:NP_001138225.1 Gene:DIP-beta / 33125 FlyBaseID:FBgn0259245 Length:555 Species:Drosophila melanogaster
Sequence 2:NP_001005580.1 Gene:opcml / 449538 ZFINID:ZDB-GENE-040927-3 Length:342 Species:Danio rerio


Alignment Length:328 Identity:87/328 - (26%)
Similarity:142/328 - (43%) Gaps:64/328 - (19%)


- Green bases have known domain annotations that are detailed below.


  Fly   100 FVIPL------------ENVTIAQGRDATFTCVVNNLGGHRVSGDGSSAPAKVAWIKADAKAILA 152
            |::|.            :|:|:.||..|...|.::|    :||        :|||:  :...|| 
Zfish    23 FLVPAGVPARSGDSYLKDNITVRQGDSAVLKCSMDN----KVS--------RVAWL--NRTTIL- 72

  Fly   153 IHEHVITNNDRLSVQ------HNDYNTWTLNIRGVKMEDAGKYMCQVNTDPMKMQTAT-LEVVIP 210
                 .|.|::.|:.      :...|.:::.|..|.:.|.|.|:|.:.|:.....|.. |.|.:|
Zfish    73 -----FTGNEKWSLDPRVVLLNTAVNEYSIKILNVNLYDEGPYVCSILTNKKPESTKVHLIVQVP 132

  Fly   211 PDIINEETSGDMMVPEGGSAKLVCRARGHPKPKITW--RREDGREIIARNGSHQKTKAQSVEGEM 273
            ..|:|..|  |:.|.||.:..|:|.|.|.|:|.|.|  |...|..|:             .|||.
Zfish   133 ARIVNVST--DVSVNEGSNVSLMCLAIGRPEPSILWKFRSSKGNRIV-------------TEGEY 182

  Fly   274 LTLSKITRSEMGAYMCIASNGVPPTVSKRMKLQVHFHPLVQVPNQLVGAPVLTDVTLICNVEASP 338
            :.::.||:...|:|.||.||.:.|...:.:::.|::.|::..... .|..|.....|.|...|.|
Zfish   183 VEMTGITKDMSGSYDCITSNDISPPDVRTVQVTVNYPPVISRARS-TGTAVGQKGVLWCEASAVP 246

  Fly   339 KAINYWQRENGE-MIIAGDRYALTEKENNMYAIEMILHIKRLQSSDFGGYKCISKNSIGDTEGTI 402
            .|...|.:  || .|:.|......|.:..    :.:|....:...|:|.|.|::.|::|.|..:|
Zfish   247 LADFQWFK--GERRILNGFNGVKIENKGK----QSMLTFFNVSEEDYGNYTCVAINTLGITNASI 305

  Fly   403 RLY 405
            .||
Zfish   306 ILY 308

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
DIP-betaNP_001138225.1 I-set 98..209 CDD:254352 30/127 (24%)
ig 102..195 CDD:278476 25/110 (23%)
IG_like 219..307 CDD:214653 27/89 (30%)
Ig 221..307 CDD:299845 27/87 (31%)
Ig 311..404 CDD:299845 23/93 (25%)
IG_like 327..405 CDD:214653 20/78 (26%)
opcmlNP_001005580.1 Ig 41..129 CDD:299845 27/107 (25%)
IG_like 41..129 CDD:214653 27/107 (25%)
IG_like 139..216 CDD:214653 28/91 (31%)
IGc2 146..202 CDD:197706 22/68 (32%)
I-set 219..307 CDD:254352 23/94 (24%)
ig 223..307 CDD:278476 22/90 (24%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C170576290
Domainoid 1 1.000 64 1.000 Domainoid score I10104
eggNOG 1 0.900 - - E1_KOG3510
Hieranoid 1 1.000 - -
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 128 1.000 Inparanoid score I4644
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D265311at33208
OrthoFinder 1 1.000 - - FOG0000150
OrthoInspector 1 1.000 - - otm26286
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X97
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
109.800

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