DRSC/TRiP Functional Genomics Resources

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Protein Alignment DIP-beta and Ama

DIOPT Version :9

Sequence 1:NP_001138225.1 Gene:DIP-beta / 33125 FlyBaseID:FBgn0259245 Length:555 Species:Drosophila melanogaster
Sequence 2:NP_731114.2 Gene:Ama / 40831 FlyBaseID:FBgn0000071 Length:341 Species:Drosophila melanogaster


Alignment Length:357 Identity:86/357 - (24%)
Similarity:148/357 - (41%) Gaps:48/357 - (13%)


- Green bases have known domain annotations that are detailed below.


  Fly    71 QLLLLLLLGNCIDLTVSNKISSVGAFEPDFVIPLENVTIAQGRDATFTCVVNNLGGHRVSGDGSS 135
            :|.||:.|..|:.:::.:.:|:     |......::|..:.|....|.|.|..:|          
  Fly    11 RLRLLIGLIFCLAISLDSVLSA-----PVISQISKDVVASVGDSVEFNCTVEEVG---------- 60

  Fly   136 APAKVAWIK----ADAKAILAIHEHVITNNDRLSVQHNDYNT------------WTLNIRGVKME 184
             ...|:|.|    :|..::      |::..:.||:....||.            :|..|:.:::.
  Fly    61 -QLSVSWAKRPSESDTNSV------VLSMRNILSLPDQRYNVTVTEGPKTGSAIYTFRIQNIEVS 118

  Fly   185 DAGKYMCQVNTDPMKMQTATLEVVI-PPDIINEETSGDMMVPEGGSAKLVCRARGHPKPKITWRR 248
            |.|.|.|||.....:..|..|.:.| .|.:|.|.|....:|.||.:.:|.|.|.|.|||.|:|.|
  Fly   119 DMGPYECQVLVSATEKVTKKLSLQIKTPPVIAENTPKSTLVTEGQNLELTCHANGFPKPTISWAR 183

  Fly   249 EDGREIIARNGSHQKTKAQSVEGEMLTLSKITRSEMGAYMCIASNGVPPTVSKRMKLQVHFHPLV 313
            |....:.|  |.|...:      ..|.:..:.|.:.|.|.|||.||......:.::::|.|.|.:
  Fly   184 EHNAVMPA--GGHLLAE------PTLRIRSVHRMDRGGYYCIAQNGEGQPDKRLIRVEVEFRPQI 240

  Fly   314 QVPNQLVGAPVLTDVTLICNVEASPKAINYWQRENGEMIIAGDRYALTEKENNMYAIEMILHIKR 378
            .|....:...|.....|.|:|:..|.....|.: ||..:.:...:.:....::......:|.|..
  Fly   241 AVQRPKIAQMVSHSAELECSVQGYPAPTVVWHK-NGVPLQSSRHHEVANTASSSGTTTSVLRIDS 304

  Fly   379 LQSSDFGGYKCISKNSIGDTEGTIRLYEMERP 410
            :...|||.|.|.:.|.:|..:..:.|::...|
  Fly   305 VGEEDFGDYYCNATNKLGHADARLHLFQTVIP 336

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
DIP-betaNP_001138225.1 I-set 98..209 CDD:254352 26/126 (21%)
ig 102..195 CDD:278476 23/108 (21%)
IG_like 219..307 CDD:214653 26/87 (30%)
Ig 221..307 CDD:299845 26/85 (31%)
Ig 311..404 CDD:299845 19/92 (21%)
IG_like 327..405 CDD:214653 16/77 (21%)
AmaNP_731114.2 I-set 33..143 CDD:254352 26/126 (21%)
Ig 37..127 CDD:299845 21/106 (20%)
IG_like 154..234 CDD:214653 26/87 (30%)
IGc2 161..223 CDD:197706 25/69 (36%)
I-set 254..330 CDD:254352 16/76 (21%)
IGc2 254..322 CDD:197706 15/68 (22%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C45442804
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG3510
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D265311at33208
OrthoFinder 1 1.000 - - FOG0000150
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X97
65.750

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