DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment DIP-beta and DIP-zeta

DIOPT Version :10

Sequence 1:NP_001138225.1 Gene:DIP-beta / 33125 FlyBaseID:FBgn0259245 Length:555 Species:Drosophila melanogaster
Sequence 2:NP_723441.2 Gene:DIP-zeta / 34231 FlyBaseID:FBgn0051708 Length:532 Species:Drosophila melanogaster


Alignment Length:406 Identity:160/406 - (39%)
Similarity:223/406 - (54%) Gaps:46/406 - (11%)


- Green bases have known domain annotations that are detailed below.


  Fly    46 ASGSGLVGLG--TGTGTGS---GCGPAIRWQLLLLLLLGNCIDLTVSNKISSVGAFEPDFVIPLE 105
            |:|:|..|.|  .|:||||   |....|        :.|...::..||  .::...||:|...:|
  Fly    66 AAGNGAGGGGPVAGSGTGSTVVGSNGVI--------VAGGGANVPTSN--LNIVVEEPEFTEYIE 120

  Fly   106 NVTIAQGRDATFTCVVNNLGGHRVSGDGSSAPAKVAWIKADAKAILAIHEHVITNNDRLSV---Q 167
            |||:..||:....|.|.|||.:           ||||:..:..|||.:|.||||.|.|:||   :
  Fly   121 NVTVPAGRNVKLGCSVKNLGSY-----------KVAWMHFEQSAILTVHNHVITRNPRISVTHDK 174

  Fly   168 HNDYNTWTLNIRGVKMEDAGKYMCQVNTDPMKMQTATLEVVIPPDIINEETSGDMMVPEGGSAKL 232
            |:.:.||.|:|..|..||.|:||||:||...|.|...|.||:||:|.:..:|.|::|.||.:..|
  Fly   175 HDRHRTWYLHINNVHEEDRGRYMCQINTVTAKTQFGYLNVVVPPNIDDSLSSSDVIVREGANISL 239

  Fly   233 VCRARGHPKPKITWRREDGREIIARNGSHQKTKAQSVEGEMLTLSKITRSEMGAYMCIASNGVPP 297
            .|||.|.|:|.|.|:|:|... ||.|.:|   .....||:.|.:::|:|.:||||:|||||||||
  Fly   240 RCRASGSPRPIIKWKRDDNSR-IAINKNH---IVNEWEGDTLEITRISRLDMGAYLCIASNGVPP 300

  Fly   298 TVSKRMKLQVHFHPLVQVPNQLVGAPVLTDVTLICNVEASPKAINYWQRENGEMIIAGDRYALTE 362
            |||||:|:.|.|.|::.:|:||||||...:||:.|..||.|.::|||.|..|.:|....:|.:..
  Fly   301 TVSKRIKVSVDFPPMLLIPHQLVGAPEGFNVTIECFTEAHPTSLNYWTRGEGPIIHDSHKYKVEA 365

  Fly   363 KEN-NMYAIEMILHIKRLQSSDFGGYKCISKNSIGDTEGTIRLYEMERPGKKILRDDDLNEVSKN 426
            ... ..|...|.|.|..:.|.|.|.|||::||..|:|:|.||||....|           ..:.:
  Fly   366 TVGLPAYKTHMKLTIINVSSGDDGIYKCVAKNPRGETDGIIRLYVSYPP-----------TTASS 419

  Fly   427 EVVQKDTR-SEDGSRN 441
            .:...||. .|:|..|
  Fly   420 GIYSTDTHWGENGINN 435

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
DIP-betaNP_001138225.1 Ig 98..209 CDD:472250 48/113 (42%)
Ig strand B 115..119 CDD:409353 0/3 (0%)
Ig strand C 139..143 CDD:409353 3/3 (100%)
Ig strand E 174..178 CDD:409353 2/3 (67%)
Ig strand F 188..193 CDD:409353 3/4 (75%)
Ig strand G 202..205 CDD:409353 0/2 (0%)
Ig 211..307 CDD:472250 46/95 (48%)
Ig strand B 230..234 CDD:409353 1/3 (33%)
Ig strand C 243..247 CDD:409353 1/3 (33%)
Ig strand E 272..276 CDD:409353 1/3 (33%)
Ig strand F 286..291 CDD:409353 3/4 (75%)
Ig strand G 300..303 CDD:409353 2/2 (100%)
IG_like 327..405 CDD:214653 30/78 (38%)
Ig strand B 328..332 CDD:409353 2/3 (67%)
Ig strand C 341..346 CDD:409353 3/4 (75%)
Ig strand E 365..376 CDD:409353 3/11 (27%)
Ig strand F 386..391 CDD:409353 3/4 (75%)
Ig strand G 399..402 CDD:409353 1/2 (50%)
DIP-zetaNP_723441.2 IG_like 120..216 CDD:214653 46/106 (43%)
Ig strand B 130..134 CDD:409405 0/3 (0%)
Ig strand C 143..147 CDD:409405 3/3 (100%)
Ig strand E 178..185 CDD:409405 3/6 (50%)
IgI_1_MuSK 218..310 CDD:409562 46/95 (48%)
Ig strand A 218..221 CDD:409562 1/2 (50%)
Ig strand A' 226..231 CDD:409562 2/4 (50%)
Ig strand B 237..244 CDD:409562 3/6 (50%)
Ig strand C 250..255 CDD:409562 2/4 (50%)
Ig strand C' 257..259 CDD:409562 1/1 (100%)
Ig strand D 267..270 CDD:409562 1/5 (20%)
Ig strand E 275..281 CDD:409562 1/5 (20%)
Ig strand F 288..295 CDD:409562 5/6 (83%)
Ig strand G 302..310 CDD:409562 5/7 (71%)
IG_like 325..410 CDD:214653 33/84 (39%)
Ig strand B 331..335 CDD:143207 2/3 (67%)
Ig strand C 344..348 CDD:143207 2/3 (67%)
Ig strand E 376..380 CDD:143207 2/3 (67%)
Ig strand F 390..395 CDD:143207 3/4 (75%)
Ig strand G 403..406 CDD:143207 1/2 (50%)

Return to query results.
Submit another query.