DRSC/TRiP Functional Genomics Resources

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Protein Alignment DIP-beta and Opcml

DIOPT Version :10

Sequence 1:NP_001138225.1 Gene:DIP-beta / 33125 FlyBaseID:FBgn0259245 Length:555 Species:Drosophila melanogaster
Sequence 2:XP_006510497.1 Gene:Opcml / 330908 MGIID:97397 Length:354 Species:Mus musculus


Alignment Length:380 Identity:103/380 - (27%)
Similarity:164/380 - (43%) Gaps:66/380 - (17%)


- Green bases have known domain annotations that are detailed below.


  Fly    64 CGPA-IRWQLLLLLLLGNCIDLTVSNKISSVGAFEPDFVIPLENVTIAQGRDATFTCVVNNLGGH 127
            ||.. :.|:.|:::.|.....:.....:.|..|..|.   .::|||:.||..||..|.:::    
Mouse     4 CGYLFLPWKCLVVVSLRLLFLVPTGVPVRSGDATFPK---AMDNVTVRQGESATLRCTIDD---- 61

  Fly   128 RVSGDGSSAPAKVAWIKADAKAILAIHEHVITNNDRLSVQH------NDYNTWTLNIRGVKMEDA 186
            ||:        :|||:  :...||      ...||:.|:..      |....:::.|:.|.:.|.
Mouse    62 RVT--------RVAWL--NRSTIL------YAGNDKWSIDPRVIILVNTPTQYSIMIQNVDVYDE 110

  Fly   187 GKYMCQVNTD--PMKMQTATLEVVIPPDIINEETSGDMMVPEGGSAKLVCRARGHPKPKITWRR- 248
            |.|.|.|.||  | |.....|.|.:||.|:|  .|.|:.|.||.|..|:|.|.|.|:|.:|||. 
Mouse   111 GPYTCSVQTDNHP-KTSRVHLIVQVPPQIMN--ISSDITVNEGSSVTLLCLAIGRPEPTVTWRHL 172

  Fly   249 --EDGREIIARNGSHQKTKAQSVEGEMLTLSKITRSEMGAYMCIASNGVPPTVSKRMKLQVHFHP 311
              ::|:..::             |.|.|.:|.|.|.:.|.|.|.|.|.|.....:::|:.|::.|
Mouse   173 SVKEGQGFVS-------------EDEYLEISDIKRDQSGEYECSALNDVAAPDVRKVKITVNYPP 224

  Fly   312 LVQVPNQLVGAPVLTDVTLICNVEASPKAINYWQRENGEMIIAGDRYALTEKENNMYAIEMILHI 376
            .:..... .|..|.....|.|...|.|.|...|.:|:..:....|...: |.:..:..:...   
Mouse   225 YISKAKN-TGVSVGQKGILSCEASAVPMAEFQWFKEDTRLATGLDGVRI-ENKGRISTLTFF--- 284

  Fly   377 KRLQSSDFGGYKCISKNSIGDTEGTIRLYEME------RPGKKILRDDDLNEVSK 425
             .:...|:|.|.|::.|.:|:|..:|.|||:.      .||..|   |.:|..|:
Mouse   285 -NVSEKDYGNYTCVATNKLGNTNASITLYEISPSSAVAGPGAVI---DGVNSASR 335

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
DIP-betaNP_001138225.1 Ig 98..209 CDD:472250 33/118 (28%)
Ig strand B 115..119 CDD:409353 2/3 (67%)
Ig strand C 139..143 CDD:409353 2/3 (67%)
Ig strand E 174..178 CDD:409353 0/3 (0%)
Ig strand F 188..193 CDD:409353 2/4 (50%)
Ig strand G 202..205 CDD:409353 0/2 (0%)
Ig 211..307 CDD:472250 32/98 (33%)
Ig strand B 230..234 CDD:409353 1/3 (33%)
Ig strand C 243..247 CDD:409353 1/3 (33%)
Ig strand E 272..276 CDD:409353 2/3 (67%)
Ig strand F 286..291 CDD:409353 2/4 (50%)
Ig strand G 300..303 CDD:409353 0/2 (0%)
IG_like 327..405 CDD:214653 17/77 (22%)
Ig strand B 328..332 CDD:409353 1/3 (33%)
Ig strand C 341..346 CDD:409353 1/4 (25%)
Ig strand E 365..376 CDD:409353 0/10 (0%)
Ig strand F 386..391 CDD:409353 2/4 (50%)
Ig strand G 399..402 CDD:409353 0/2 (0%)
OpcmlXP_006510497.1 Ig 44..132 CDD:472250 31/108 (29%)
Ig strand B 53..57 CDD:409353 2/3 (67%)
Ig strand C 65..69 CDD:409353 2/3 (67%)
Ig strand E 98..102 CDD:409353 0/3 (0%)
Ig strand F 112..117 CDD:409353 2/4 (50%)
Ig strand G 125..128 CDD:409353 0/2 (0%)
Ig_3 135..206 CDD:464046 30/85 (35%)
Ig 224..312 CDD:472250 20/93 (22%)
Ig strand B 240..244 CDD:409353 1/3 (33%)
Ig strand C 253..257 CDD:409353 0/3 (0%)
Ig strand E 279..283 CDD:409353 0/3 (0%)
Ig strand F 293..298 CDD:409353 2/4 (50%)
Ig strand G 306..309 CDD:409353 0/2 (0%)

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