DRSC/TRiP Functional Genomics Resources

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Protein Alignment DIP-beta and Kirrel3

DIOPT Version :9

Sequence 1:NP_001138225.1 Gene:DIP-beta / 33125 FlyBaseID:FBgn0259245 Length:555 Species:Drosophila melanogaster
Sequence 2:XP_038937320.1 Gene:Kirrel3 / 315546 RGDID:1311382 Length:869 Species:Rattus norvegicus


Alignment Length:325 Identity:80/325 - (24%)
Similarity:134/325 - (41%) Gaps:68/325 - (20%)


- Green bases have known domain annotations that are detailed below.


  Fly   103 PLENVTIAQGRDATFTCVVNNLGGHRVSGDGSSAPAKVAWIKADAKAI-----LAIHEHVITNND 162
            |.:.|.:: |:..|..|.:....|.            |.||| |..|:     |:.:...:...:
  Rat    54 PQDQVVVS-GQPVTLLCAIPEYDGF------------VLWIK-DGLALGVGRDLSSYPQYLVVGN 104

  Fly   163 RLSVQHNDYNTWTLNIRGVKMEDAGKYMCQVNTDPMKMQTATLEVVIPPD--IINEETSGDMM-V 224
            .||.:|:      |.|...:::|...|.||.....::.:.|.|.|::|||  ||   ..|.:: :
  Rat   105 HLSGEHH------LKILRAELQDDAVYECQAIQAAIRSRPARLTVLVPPDDPII---LGGPVISL 160

  Fly   225 PEGGSAKLVCRA-RGHPKPKITWRREDGREIIARNG-SHQKTKAQSVEGEMLTLSKITRS----E 283
            ..|....|.|.| ...|...|.|.|:.  |:|  || ::.||..:..:.|.: :|.:..|    |
  Rat   161 RAGDPLNLTCHADNAKPAASIIWLRKG--EVI--NGATYSKTLLRDGKRESI-VSTLFISPGDVE 220

  Fly   284 MG-AYMCIASN-GVPPTVSKRMKLQVHFHPLVQVPNQLVGAPVLTD--VTLICNVEASPKAINYW 344
            .| :.:|.|:| .:|......:.:.:...|||.:  .:...|||.|  ||..|:.:|:|....|.
  Rat   221 NGQSIVCRATNKAIPGGKETSVTIDIQHPPLVNL--SVEPQPVLEDNIVTFHCSAKANPAVTQYR 283

  Fly   345 QRENGEMI--IAGDRYALTEKENNMYAIEMILHIKRLQSSDFGGYKCISKNSIGDT--EGTIRLY 405
            ..:.|.:|  .:|:.|..|  .:..|..|.:              .|...|::|.|  ..|:.:|
  Rat   284 WAKRGHIIKEASGELYRTT--VDYTYFSEPV--------------SCEVTNALGSTNLSRTVDVY 332

  Fly   406  405
              Rat   333  332

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
DIP-betaNP_001138225.1 I-set 98..209 CDD:254352 25/110 (23%)
ig 102..195 CDD:278476 22/96 (23%)
IG_like 219..307 CDD:214653 24/96 (25%)
Ig 221..307 CDD:299845 23/94 (24%)
Ig 311..404 CDD:299845 25/98 (26%)
IG_like 327..405 CDD:214653 19/83 (23%)
Kirrel3XP_038937320.1 IG_like 54..143 CDD:214653 24/108 (22%)
Ig strand A' 56..60 CDD:409353 1/3 (33%)
Ig strand B 64..71 CDD:409353 2/6 (33%)
Ig strand C 78..82 CDD:409353 2/3 (67%)
Ig strand C' 84..87 CDD:409353 0/2 (0%)
Ig strand D 97..101 CDD:409353 0/3 (0%)
Ig strand E 104..116 CDD:409353 5/17 (29%)
Ig strand G 132..143 CDD:409353 2/10 (20%)
IgI_2_KIRREL3-like 149..246 CDD:409416 26/104 (25%)
Ig strand B 166..170 CDD:409416 1/3 (33%)
Ig strand C 180..184 CDD:409416 1/3 (33%)
Ig strand E 210..214 CDD:409416 1/3 (33%)
Ig strand F 224..229 CDD:409416 1/4 (25%)
Ig strand G 239..242 CDD:409416 0/2 (0%)
Ig <267..334 CDD:416386 19/82 (23%)
Ig strand B 267..274 CDD:409353 3/6 (50%)
Ig strand C 279..286 CDD:409353 1/6 (17%)
Ig strand C' 288..291 CDD:409353 1/2 (50%)
Ig strand D 298..302 CDD:409353 1/3 (33%)
Ig strand E 304..310 CDD:409353 1/5 (20%)
Ig strand G 321..334 CDD:409353 4/12 (33%)
Ig 335..416 CDD:416386
Ig strand A' 343..347 CDD:409353
Ig strand B 350..360 CDD:409353
Ig strand C 365..371 CDD:409353
Ig strand E 381..387 CDD:409353
IgI_5_KIRREL3 418..515 CDD:409479
Ig strand B 436..440 CDD:409479
Ig strand C 450..454 CDD:409479
Ig strand E 481..485 CDD:409479
Ig strand F 496..501 CDD:409479
Ig strand G 509..512 CDD:409479
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG3510
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
21.810

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