DRSC/TRiP Functional Genomics Resources

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Protein Alignment DIP-beta and Cntn4

DIOPT Version :9

Sequence 1:NP_001138225.1 Gene:DIP-beta / 33125 FlyBaseID:FBgn0259245 Length:555 Species:Drosophila melanogaster
Sequence 2:NP_001103219.1 Gene:Cntn4 / 269784 MGIID:1095737 Length:1026 Species:Mus musculus


Alignment Length:492 Identity:111/492 - (22%)
Similarity:181/492 - (36%) Gaps:129/492 - (26%)


- Green bases have known domain annotations that are detailed below.


  Fly    66 PAIRWQLLLLLLLGNCIDLTVSNKISSVGAFEPDFVIPLENVTIAQGRDA-TFTCVVNNLGGHRV 129
            |.|||:     :.|..:|:.:..:.|.|   :...:|...|.|    :|| |:.|:..|..|..|
Mouse    58 PHIRWK-----INGTDVDIGMDFRYSVV---DGSLLINNPNKT----QDAGTYQCIATNSFGTIV 110

  Fly   130 SGDGSSAPAKVAWIKADAKAILAI--------------HEHVITN----NDRLSVQHN----DYN 172
            |.:.....|.:...|...::.:::              |...::.    |:..|.|.|    ...
Mouse   111 SREAKLQFAYLENFKTRTRSTVSVRRGQGMVLLCGPPPHSGELSYAWIFNEYPSYQDNRRFVSQE 175

  Fly   173 TWTLNIRGVKMEDAGKYMCQVNTDPMKMQTATLEVVIPPD----IINEETSG------DMMVPE- 226
            |..|.|..|:..|.|.|.|.|.      .|.|...|:.|.    :.|:...|      ::..|| 
Mouse   176 TGNLYIAKVEKSDVGNYTCVVT------NTVTNHKVLGPPTPLILRNDGVMGEYEPKIEVQFPET 234

  Fly   227 -----GGSAKLVCRARGHPKPKITWRREDGREIIARNGSHQKTKAQSVEGEMLTLSKITRSEMGA 286
                 |.:.||.|.|.|:|.|.|.|||.||:. |||.....|:..      :|.:....:.:.|:
Mouse   235 VPAEKGTTVKLECFALGNPVPTILWRRADGKP-IARKARRHKSNG------ILEIPNFQQEDAGS 292

  Fly   287 YMCIASNGVPPTVSKRMKLQVHFHP-LVQVPNQLVGAPVLTDVTLICNVEASPKAINYWQRENGE 350
            |.|:|.|.....|:|. :|..:..| .||:.|. :...:...|...|.....||....|.: ||:
Mouse   293 YECVAENSRGKNVAKG-QLTFYAQPNWVQIIND-IHVAMEESVFWECKANGRPKPTYRWLK-NGD 354

  Fly   351 MIIAGDRYALTEKENNMYAIEMILHIKRLQSSDFGGYKCISKNSIG---------------DTEG 400
            .::..||..:.:...|:..:.:         ||.|.|:|:::|..|               |...
Mouse   355 PLLTRDRIQIEQGTLNITIVNL---------SDAGMYQCVAENKHGVIFSSAELSVIAESPDFSR 410

  Fly   401 TI-----------------------RLYEMERPGKKILRDDDLNEVSK--NEVVQKDTRSEDGS- 439
            |:                       |.....|.|::|||:::...:|:  |..:...|:|:.|| 
Mouse   411 TLLKRVTLVKVGGEVVIECKPKASPRPVYTWRKGREILRENERITISEDGNLRIINVTKSDAGSY 475

  Fly   440 -----------RNLNGRLYKDRAPDQHPASGSDQLLG 465
                       .:....:.||......|.|..|..:|
Mouse   476 TCIATNHFGTASSTGNVIVKDPTKVMVPPSSMDVTVG 512

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
DIP-betaNP_001138225.1 I-set 98..209 CDD:254352 29/133 (22%)
ig 102..195 CDD:278476 27/115 (23%)
IG_like 219..307 CDD:214653 30/99 (30%)
Ig 221..307 CDD:299845 29/91 (32%)
Ig 311..404 CDD:299845 23/131 (18%)
IG_like 327..405 CDD:214653 20/115 (17%)
Cntn4NP_001103219.1 Ig 25..118 CDD:386229 19/71 (27%)
Ig 120..213 CDD:386229 19/98 (19%)
Ig 225..313 CDD:386229 29/95 (31%)
Ig 318..401 CDD:386229 20/93 (22%)
Ig 422..494 CDD:386229 12/71 (17%)
Ig6_Contactin-4 513..597 CDD:143261 111/492 (23%)
FN3 597..690 CDD:238020
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 685..710
FN3 703..792 CDD:238020
FN3 804..896 CDD:238020
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 886..906
FN3 904..989 CDD:238020
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.910

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