DRSC/TRiP Functional Genomics Resources

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Protein Alignment DIP-beta and Psg18

DIOPT Version :9

Sequence 1:NP_001138225.1 Gene:DIP-beta / 33125 FlyBaseID:FBgn0259245 Length:555 Species:Drosophila melanogaster
Sequence 2:NP_036093.2 Gene:Psg18 / 26438 MGIID:1347251 Length:476 Species:Mus musculus


Alignment Length:440 Identity:94/440 - (21%)
Similarity:145/440 - (32%) Gaps:154/440 - (35%)


- Green bases have known domain annotations that are detailed below.


  Fly     7 VKESGERIADIS-----------CSQEHTTKFSPKLSQVAKHRKLAQLEIASGSGLVGLGTGTGT 60
            :.:.||.:::.|           |.:. ||..||.:       :|....:|:|            
Mouse   125 ISKRGEIVSNTSLYLHVYSSLFICVRP-TTLISPTI-------ELVPASVAAG------------ 169

  Fly    61 GSGCGPAIRWQLLLLLLLGNCIDLTVSNKISSVGAFEPDFVIPLENVTIAQGRDATFTCVVNNLG 125
            ||           :|||:.|     :...:.|:  |....:|....|.||:.|.|          
Mouse   170 GS-----------ILLLVHN-----IPKYLQSL--FWYKGLIAFNKVEIARYRTA---------- 206

  Fly   126 GHRVSGDGSSAPAKVAWIKADAKAILAIHEHVITNNDRL--SVQHNDYNTWTLN--IRGVKMEDA 186
                ...|...||...            .|.|.:|...|  :|...|...:||.  .|..|||.|
Mouse   207 ----KNSGEPGPAHSG------------RETVYSNGSLLLQNVTWKDTGFYTLRTLTRYQKMEFA 255

  Fly   187 GKYM---------------CQVNTDPMKMQTA-----TLEV-VIPPDIINEE------TSGDMMV 224
            ..|:               .|::.||:....|     .|:| .:|.|:....      ::.|..:
Mouse   256 HIYLQVDTSHSLCCDTLDSAQLSIDPVPRHAAEGGSVLLQVHNLPEDVQTFSWYKGVLSTQDFKI 320

  Fly   225 PEGGSA-KLVCRARGHPKPKITWRREDGREIIARNGSHQKTKAQSVEGEMLTLSKITRSEMGAYM 288
            .|...| |.:.|.|.|.:          |||...|||             |.|..:|..:.|.|.
Mouse   321 AEYSIATKSIIRGRAHSR----------REIGYTNGS-------------LLLQDVTEKDSGLYT 362

  Fly   289 CIASNGVPPTVSKRMK-----LQVHFHPLVQVPNQLV---GAPVLTDVTLICNVEASPKAINYWQ 345
            .|       |:...::     :||:.|.||..|...|   ...|.:.|...|..:.:..:|. |.
Mouse   363 LI-------TIDSNVRVVTAHVQVNIHQLVTQPAMRVTDSTVRVQSSVVFTCFSDNTGVSIR-WL 419

  Fly   346 RENGEMIIAGDRYALTEKENNMYAIEMILHIKRLQSSDFGGYKCISKNSI 395
            ..|       .|..|||: ..:...:..|.|..::..|.|.|:|.:.|.:
Mouse   420 FNN-------QRLQLTER-MTLSPSKCQLRIHTVRKEDAGEYQCEAFNPV 461

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
DIP-betaNP_001138225.1 I-set 98..209 CDD:254352 29/135 (21%)
ig 102..195 CDD:278476 24/111 (22%)
IG_like 219..307 CDD:214653 20/93 (22%)
Ig 221..307 CDD:299845 20/91 (22%)
Ig 311..404 CDD:299845 21/88 (24%)
IG_like 327..405 CDD:214653 16/69 (23%)
Psg18NP_036093.2 Ig_CEACAM_D1 36..141 CDD:143251 3/15 (20%)
IG_like <104..138 CDD:214653 3/12 (25%)
Ig_CEACAM_D1 157..261 CDD:143251 35/166 (21%)
Ig_CEACAM_D1 277..379 CDD:143251 27/131 (21%)
IG_like 396..473 CDD:214653 17/75 (23%)
IGc2 401..462 CDD:197706 16/70 (23%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
00.000

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