DRSC/TRiP Functional Genomics Resources

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Protein Alignment DIP-beta and Cadm4

DIOPT Version :10

Sequence 1:NP_001138225.1 Gene:DIP-beta / 33125 FlyBaseID:FBgn0259245 Length:555 Species:Drosophila melanogaster
Sequence 2:NP_694752.1 Gene:Cadm4 / 260299 MGIID:2449088 Length:388 Species:Mus musculus


Alignment Length:481 Identity:112/481 - (23%)
Similarity:173/481 - (35%) Gaps:123/481 - (25%)


- Green bases have known domain annotations that are detailed below.


  Fly    65 GPAIRWQLLLLLLLGNCIDLTVSNKISSVGAFEPDFVIPLENVTIAQGRDATFTCVVNNLGGHRV 129
            |.|.|:|..||||...........::.:            ||||:|:|..|..||.::..     
Mouse     2 GRARRFQWPLLLLWAAAAGPGTGQEVQT------------ENVTVAEGGVAEITCRLHQY----- 49

  Fly   130 SGDGSSAPAKVAWIKADAKAILAIHEHVITNNDRLSVQHNDYNTWTLNIRGVKMEDAGKYMCQVN 194
              |||     :..|:..|:..|..:......::|..::........:.:...::||.|.|.||:.
Mouse    50 --DGS-----IVVIQNPARQTLFFNGTRALKDERFQLEEFSPRRVRIRLSDARLEDEGGYFCQLY 107

  Fly   195 TDPMKMQTATLEVVIPPDIINEETSGDMMVPEGGSAKLVCRA-RGHPKPKITWRREDGREIIARN 258
            |:....|.|||.|::.|:  |..........|||..:|.|.. |..|...:.|.| |.:|:...:
Mouse   108 TEDTHHQIATLTVLVAPE--NPVVEVREQAVEGGEVELSCLVPRSRPAAVLRWYR-DRKELKGVS 169

  Fly   259 GSHQKTKAQSVEGEMLTLSKITRSEMGA-YMCIASN-GVPPTVSKRMK--LQVHFHPLVQV-PNQ 318
            ...:..|..||...:  ..::.|.:.|. .:|.|.| .:|...||:.:  |.|.:.|..:: .:|
Mouse   170 SGQENGKVWSVASTV--RFRVDRKDDGGIVICEAQNQALPSGHSKQTQYVLDVQYSPTARIHASQ 232

  Fly   319 LVGAPVLTDVTLI--CNVEASPKAINY-WQRENGEMIIAGDRYALTEKENNMYAIEMILHIKRLQ 380
            .|   |....||:  |.|..:|:.... |.|.|         .:|.|:..   |:...|.:..|.
Mouse   233 AV---VREGDTLVLTCAVTGNPRPNQIRWNRGN---------ESLPERAE---AVGETLTLPGLV 282

  Fly   381 SSDFGGYKCISKNSIGDTEG--TIRLYEMERPGKKILRDDDLNEVSKNEVVQKDTRSEDGSRNLN 443
            |:|.|.|.|.:.|..|....  .:.:|:   ||               .||:..|          
Mouse   283 SADNGTYTCEAANKHGHARALYVLVVYD---PG---------------AVVEAQT---------- 319

  Fly   444 GRLYKDRAPDQHPASGSDQLLGRGTMRLIGTFLLALLVLFTALAEAGPTTLSCRTKGG------- 501
                  ..|                ..::|. :|||||........|....|.|.||.       
Mouse   320 ------SVP----------------YAIVGG-ILALLVFLIICVLVGMVWCSVRQKGSYLTHEAS 361

  Fly   502 ---RQKKAKETSWNGRRARDGREDGH 524
               .|.:|:|...||       .|||
Mouse   362 GLDEQGEAREAFLNG-------GDGH 380

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
DIP-betaNP_001138225.1 Ig 98..209 CDD:472250 28/110 (25%)
Ig strand B 115..119 CDD:409353 1/3 (33%)
Ig strand C 139..143 CDD:409353 0/3 (0%)
Ig strand E 174..178 CDD:409353 0/3 (0%)
Ig strand F 188..193 CDD:409353 2/4 (50%)
Ig strand G 202..205 CDD:409353 1/2 (50%)
Ig 211..307 CDD:472250 25/100 (25%)
Ig strand B 230..234 CDD:409353 1/3 (33%)
Ig strand C 243..247 CDD:409353 0/3 (0%)
Ig strand E 272..276 CDD:409353 0/3 (0%)
Ig strand F 286..291 CDD:409353 1/5 (20%)
Ig strand G 300..303 CDD:409353 2/2 (100%)
IG_like 327..405 CDD:214653 20/82 (24%)
Ig strand B 328..332 CDD:409353 2/5 (40%)
Ig strand C 341..346 CDD:409353 1/5 (20%)
Ig strand E 365..376 CDD:409353 2/10 (20%)
Ig strand F 386..391 CDD:409353 2/4 (50%)
Ig strand G 399..402 CDD:409353 0/4 (0%)
Cadm4NP_694752.1 Ig 29..120 CDD:472250 27/114 (24%)
Ig strand B 40..44 CDD:409465 1/3 (33%)
Ig strand C 53..57 CDD:409465 0/3 (0%)
Ig strand E 87..91 CDD:409465 0/3 (0%)
Ig strand F 101..106 CDD:409465 2/4 (50%)
Ig strand G 113..116 CDD:409465 1/2 (50%)
IgI_2_Necl-4 121..220 CDD:409468 25/103 (24%)
Ig strand A 121..124 CDD:409468 0/2 (0%)
Ig strand A' 127..131 CDD:409468 0/3 (0%)
Ig strand B 139..149 CDD:409468 3/9 (33%)
Ig strand C 152..161 CDD:409468 3/9 (33%)
Ig strand C' 162..165 CDD:409468 0/2 (0%)
Ig strand D 167..174 CDD:409468 0/6 (0%)
Ig strand E 177..187 CDD:409468 2/11 (18%)
Ig strand F 195..203 CDD:409468 2/7 (29%)
Ig strand G 212..219 CDD:409468 1/6 (17%)
Ig_3 224..295 CDD:464046 22/85 (26%)
4.1m 344..362 CDD:128590 4/17 (24%)

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