DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment DIP-beta and NEGR1

DIOPT Version :9

Sequence 1:NP_001138225.1 Gene:DIP-beta / 33125 FlyBaseID:FBgn0259245 Length:555 Species:Drosophila melanogaster
Sequence 2:NP_776169.2 Gene:NEGR1 / 257194 HGNCID:17302 Length:354 Species:Homo sapiens


Alignment Length:358 Identity:93/358 - (25%)
Similarity:150/358 - (41%) Gaps:68/358 - (18%)


- Green bases have known domain annotations that are detailed below.


  Fly    61 GSGCGPAIRWQLLLLL----LLGNCIDLTVSNKISSVGAFEPDFV-IPLENVTIAQGRDATFTCV 120
            |:.|  :.:|...:||    ||.:|:....|          .||. ..::|:.:.:|..|...|.
Human     9 GACC--SNQWLAAVLLSLCCLLPSCLPAGQS----------VDFPWAAVDNMMVRKGDTAVLRCY 61

  Fly   121 VNNLGGHRVSGDGSSAPAKVAWIKADAKAILAIHEHVITNNDRLSVQHNDYNTWTLNIRGVKMED 185
            :.         ||:|   |.||:  :..:|:.......:.:.|:|:...:...::|.|:.|.:.|
Human    62 LE---------DGAS---KGAWL--NRSSIIFAGGDKWSVDPRVSISTLNKRDYSLQIQNVDVTD 112

  Fly   186 AGKYMCQVNTD--PMKMQTATLEVVIPPDIINEETSGDMMVPEGGSAKLVCRARGHPKPKITWRR 248
            .|.|.|.|.|.  |..|| ..|.|.:||.|.  :.|.||.|.||.:..|.|.|.|.|:|.|:|| 
Human   113 DGPYTCSVQTQHTPRTMQ-VHLTVQVPPKIY--DISNDMTVNEGTNVTLTCLATGKPEPSISWR- 173

  Fly   249 EDGREIIARNGSHQKTKAQSVE-GEMLTLSKITRSEMGAYMCIASNGVPPTVSKRMKLQVHFHPL 312
                        |....|:..| |:.|.:..|||.:.|.|.|.|.|.|.....:::|:.|:|.|.
Human   174 ------------HISPSAKPFENGQYLDIYGITRDQAGEYECSAENDVSFPDVRKVKVVVNFAPT 226

  Fly   313 VQVPNQLVGAPVLTDVTLICNVEASPKAINYWQRE----NGE--MIIAGDRYALTEKENNMYAIE 371
            :|........|..:.:.........|.|..:::.|    ||:  :||..            ::..
Human   227 IQEIKSGTVTPGRSGLIRCEGAGVPPPAFEWYKGEKKLFNGQQGIIIQN------------FSTR 279

  Fly   372 MILHIKRLQSSDFGGYKCISKNSIGDTEGTIRL 404
            .||.:..:....||.|.|::.|.:|.|..::.|
Human   280 SILTVTNVTQEHFGNYTCVAANKLGTTNASLPL 312

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
DIP-betaNP_001138225.1 I-set 98..209 CDD:254352 29/113 (26%)
ig 102..195 CDD:278476 21/92 (23%)
IG_like 219..307 CDD:214653 30/88 (34%)
Ig 221..307 CDD:299845 29/86 (34%)
Ig 311..404 CDD:299845 19/98 (19%)
IG_like 327..405 CDD:214653 17/84 (20%)
NEGR1NP_776169.2 IG 47..135 CDD:214652 26/102 (25%)
IGc2 152..210 CDD:197706 24/70 (34%)
Ig_3 225..301 CDD:372822 16/87 (18%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C165143403
Domainoid 1 1.000 45 1.000 Domainoid score I12195
eggNOG 1 0.900 - - E1_KOG3510
Hieranoid 1 1.000 - -
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D265311at33208
OrthoFinder 1 1.000 - - FOG0000150
OrthoInspector 1 1.000 - - mtm8497
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X97
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
User_Submission 00.000 Not matched by this tool.
98.750

Return to query results.
Submit another query.