DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment DIP-beta and Tapbpl

DIOPT Version :9

Sequence 1:NP_001138225.1 Gene:DIP-beta / 33125 FlyBaseID:FBgn0259245 Length:555 Species:Drosophila melanogaster
Sequence 2:NP_663366.2 Gene:Tapbpl / 213233 MGIID:2384853 Length:451 Species:Mus musculus


Alignment Length:427 Identity:91/427 - (21%)
Similarity:146/427 - (34%) Gaps:141/427 - (33%)


- Green bases have known domain annotations that are detailed below.


  Fly     5 LVVKESGERIADISCSQEHTT----KFSPKLSQVAKHRK----LAQLEIASGSGLVGLGTGTGTG 61
            ||.....|.:....||.:..|    |:..:..|.|...|    ::.::::.|             
Mouse   105 LVQIPQAEALLHADCSGKAVTCEISKYFLQARQEATFEKAHWFISNMQVSRG------------- 156

  Fly    62 SGCGPAIRWQLLLLLLLGNCIDLTVSNKISSVGAF-EPDFVIPLENVTIAQGRDAT--------F 117
               ||::...:..|             :.:.|||. .|...:||.    |||...|        .
Mouse   157 ---GPSVSMVMKTL-------------RDAEVGAVRHPTLNLPLS----AQGTVKTQVEFQVTSE 201

  Fly   118 TCVVNNLGGHRVS--GDGSSAP----AKVAWI----------------KADAK---AILAIHEHV 157
            |..:|:|.|..||  ...|.||    ..|.|.                :..||   |.|...|.:
Mouse   202 TQTLNHLLGSSVSLHCSFSMAPGLDLTGVEWRLQHKGSGQLVYSWKTGQGQAKRKGATLEPEELL 266

  Fly   158 ITNNDRLSVQHNDYNTWTLNIRGVKMEDAGKYMCQVNTDPMK-MQTATLEVVIPPDIINEETSGD 221
            ...|.            :|.:..:.::|.|.|:||::|...: .|...|.::.||.|.....:.|
Mouse   267 RAGNA------------SLTLPNLTLKDEGNYICQISTSLYQAQQIMPLNILAPPKIQLHLANKD 319

  Fly   222 MMVPEGGSAKLVCRARG-HP-KPKITWRREDGREIIARNGSHQKTKAQSVEGEMLTLSKITRSEM 284
            .:      ..|||...| :| ...:||.||:...|.|:           |.|  .:.|.:.:|.|
Mouse   320 PL------PSLVCSIAGYYPLDVGVTWIREELGGIPAQ-----------VSG--ASFSSLRQSTM 365

  Fly   285 GAY----MCIASNGVPPTVSKRMKLQVHFHPLVQVPNQLVGAPVLTDVTLICNVEASPKAINYWQ 345
            |.|    ..:|..|  ||.:..         ..||.:..:..|:.|.:.::.|.|         |
Mouse   366 GTYSISSTVMADPG--PTGATY---------TCQVAHVSLEEPLTTSMRVLPNPE---------Q 410

  Fly   346 RENGEMIIAGDRYALTEKENNMYAIEMILHIKRLQSS 382
            |....:|.|...:        :.|:.:.|.:.|.|:|
Mouse   411 RGTLGVIFASIIF--------LSALLLFLGLHRQQAS 439

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
DIP-betaNP_001138225.1 I-set 98..209 CDD:254352 33/144 (23%)
ig 102..195 CDD:278476 29/125 (23%)
IG_like 219..307 CDD:214653 23/93 (25%)
Ig 221..307 CDD:299845 23/91 (25%)
Ig 311..404 CDD:299845 15/72 (21%)
IG_like 327..405 CDD:214653 11/56 (20%)
TapbplNP_663366.2 V-set 209..306 CDD:284989 23/108 (21%)
IG_like 209..299 CDD:214653 21/101 (21%)
Ig 271..401 CDD:299845 38/171 (22%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
00.000

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