DRSC/TRiP Functional Genomics Resources

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Protein Alignment DIP-beta and Ncam1

DIOPT Version :9

Sequence 1:NP_001138225.1 Gene:DIP-beta / 33125 FlyBaseID:FBgn0259245 Length:555 Species:Drosophila melanogaster
Sequence 2:XP_006510118.1 Gene:Ncam1 / 17967 MGIID:97281 Length:1162 Species:Mus musculus


Alignment Length:342 Identity:80/342 - (23%)
Similarity:143/342 - (41%) Gaps:49/342 - (14%)


- Green bases have known domain annotations that are detailed below.


  Fly    75 LLLLGNCIDLTVSNKISSVGAFEPDFVIPLENVTIAQGRDATFTCVVNNLGGHRVSGDGSSAPAK 139
            |..||..:.|.|.             ::|.:. .|:.|....|.|        :|:||...  ..
Mouse    11 LFFLGTAVSLQVD-------------IVPSQG-EISVGESKFFLC--------QVAGDAKD--KD 51

  Fly   140 VAWIKADAKAILAIHEHVITNNDRLSVQHNDYNTWTLNIRGVKMEDAGKYMCQVNTDPMKMQTAT 204
            ::|...:.       |.:..|..|:||..||.::.||.|....::|||.|.|.|..:......||
Mouse    52 ISWFSPNG-------EKLSPNQQRISVVWNDDDSSTLTIYNANIDDAGIYKCVVTAEDGTQSEAT 109

  Fly   205 LEVVIPPDIINEETSGDMMVPEGGSAKLVCRARGHPKPKITWRREDGREIIARNGSHQKTKAQSV 269
            :.|.|...::.:.........||..|.:||.......|.|.|:.: ||::|.:    :..:...:
Mouse   110 VNVKIFQKLMFKNAPTPQEFKEGEDAVIVCDVVSSLPPTIIWKHK-GRDVILK----KDVRFIVL 169

  Fly   270 EGEMLTLSKITRSEMGAYMC---IASNGVPPTVSKRMKLQVHFHPLVQVPNQLVGAP--VLTDVT 329
            ....|.:..|.:::.|.|.|   |.:.|  ....|.:::.|:..|.||....:|.|.  :...||
Mouse   170 SNNYLQIRGIKKTDEGTYRCEGRILARG--EINFKDIQVIVNVPPTVQARQSIVNATANLGQSVT 232

  Fly   330 LICNVEASPKAINYWQRENGEMIIAGDRYALTEKENNMYAIEMI-LHIKRLQSSDFGGYKCISKN 393
            |:|:.:..|:....|.:: ||.|...:.    :.|.::::.:.. |.|:.:..:|...|.||::|
Mouse   233 LVCDADGFPEPTMSWTKD-GEPIENEEE----DDEKHIFSDDSSELTIRNVDKNDEAEYVCIAEN 292

  Fly   394 SIGDTEGTIRLYEMERP 410
            ..|:.:.:|.|....:|
Mouse   293 KAGEQDASIHLKVFAKP 309

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
DIP-betaNP_001138225.1 I-set 98..209 CDD:254352 28/110 (25%)
ig 102..195 CDD:278476 25/92 (27%)
IG_like 219..307 CDD:214653 19/90 (21%)
Ig 221..307 CDD:299845 19/88 (22%)
Ig 311..404 CDD:299845 24/95 (25%)
IG_like 327..405 CDD:214653 19/78 (24%)
Ncam1XP_006510118.1 Ig1_NCAM-1 20..115 CDD:143273 30/125 (24%)
IG 124..190 CDD:214652 15/70 (21%)
Ig3_NCAM-1_like 211..308 CDD:143207 25/101 (25%)
Ig_NCAM-1 307..413 CDD:143277 1/3 (33%)
Ig_3 417..494 CDD:372822
FN3 509..606 CDD:238020
fn3 649..731 CDD:365830
PHA03247 <905..1140 CDD:223021
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG3510
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR12231
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
32.910

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