DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment DIP-beta and Kirrel

DIOPT Version :9

Sequence 1:NP_001138225.1 Gene:DIP-beta / 33125 FlyBaseID:FBgn0259245 Length:555 Species:Drosophila melanogaster
Sequence 2:XP_011238330.1 Gene:Kirrel / 170643 MGIID:1891396 Length:805 Species:Mus musculus


Alignment Length:522 Identity:101/522 - (19%)
Similarity:164/522 - (31%) Gaps:177/522 - (33%)


- Green bases have known domain annotations that are detailed below.


  Fly   108 TIAQGRDATFTCVVNNLGGHRVSGDGSSAPAKVAWIK-----ADAKAILAIHEHVITNNDRLSVQ 167
            |:..|:.|...||:.|..|            .|.|.|     ...:.:.|...:.:..    |..
Mouse    63 TVVAGQRAVLPCVLLNYSG------------IVQWTKDGLALGMGQGLKAWPRYRVVG----SAD 111

  Fly   168 HNDYNTWTLNIRGVKMEDAGKYMCQVNTDPMKMQTATLEVVIPPDIINEETSGD----MMVPEGG 228
            ...||   |.|...::.|...|.||.....::.:.|.|.|:|||    |||..|    :::..|.
Mouse   112 AGQYN---LEITDAELSDDASYECQATEAALRSRRAKLTV
LIPP----EETRIDGGPVILLQAGT 169

  Fly   229 SAKLVCRA-RGHPKPKITWRREDGRE--------IIARNGSHQKTKAQ-SVEGEMLTLSKITRSE 283
            ...|.||| ...|...|.|.| ||.:        .:.::|..:.|.:| .:|...|.:.::    
Mouse   170 PYNLTCRAFNAKPAATIIWFR-DGTQQEGAVTSTELLKDGKRETTISQLLIEPTDLDIGRV---- 229

  Fly   284 MGAYMCIASNGV---------------PPTVSKRMKLQ--------------------------- 306
               :.|.:.|..               ||||:..::.|                           
Mouse   230 ---FTCRSMNEAIPNGKETSIELDVHHPPTVTLSIEPQTVLEGERVIFTCQATANPEILGYRWAK 291

  Fly   307 --------------------------------------------VHFHPLVQVPNQLVGAPVLTD 327
                                                        |||.|.:.|..:.....:.:|
Mouse   292 GGFLIEDAHESRYETNVDYSFFTEPVSCEVYNKVGSTNVSTLVNVHFAPRIVVYPKPTTTDIGSD 356

  Fly   328 VTLICNVEASPKAINYWQRENGEMIIAGDRYALTEKENNMYAIEMI----LHIKRLQSSDFGGYK 388
            |||.|....:|.....|.:::..|   |.|...:..|.|:.|..:.    |.:|.:..:|.|.|.
Mouse   357 VTLTCVWVGNPPLTLTWTKKDSNM---GPRLPGSPPEANLSAQVLSNSNQLLLKSVTQADAGTYT 418

  Fly   389 CIS-KNSIGDTEGTIRLYEMERPGKKILRDDDLNEVSKNEVVQKDTRSEDGSRNLNGRLYKDRAP 452
            |.: ...||..|..:.||....|            :..:|.||...|.:.|  .:...:.....|
Mouse   419 CRAIVPRIGVAEREVPLYVNGPP------------IISSEAVQFAVRGDGG--KVECFIGSTPPP 469

  Fly   453 DQHPASGSDQLLGRGTMRLI-------GTFLLALLVLFTALAEAGPTTLSCRTKGGRQKKAKETS 510
            |:...:..:..|..||:...       |:.:|:.|.:...:.....|..:|            |:
Mouse   470 DRIAWAWKENFLEVGTLERYTVERTNSGSGVLSTLTINNVMEADFQTHYNC------------TA 522

  Fly   511 WN 512
            ||
Mouse   523 WN 524

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
DIP-betaNP_001138225.1 I-set 98..209 CDD:254352 23/105 (22%)
ig 102..195 CDD:278476 20/91 (22%)
IG_like 219..307 CDD:214653 24/187 (13%)
Ig 221..307 CDD:299845 24/185 (13%)
Ig 311..404 CDD:299845 24/97 (25%)
IG_like 327..405 CDD:214653 22/82 (27%)
KirrelXP_011238330.1 Ig 54..148 CDD:386229 22/103 (21%)
Ig2_KIRREL3-like 170..251 CDD:143236 17/88 (19%)
Ig 255..336 CDD:386229 4/80 (5%)
Ig_3 340..421 CDD:372822 21/83 (25%)
Ig5_KIRREL3 439..536 CDD:143306 19/112 (17%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG3510
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
21.810

Return to query results.
Submit another query.