DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment DIP-beta and LOC1279385

DIOPT Version :10

Sequence 1:NP_001138225.1 Gene:DIP-beta / 33125 FlyBaseID:FBgn0259245 Length:555 Species:Drosophila melanogaster
Sequence 2:XP_061513627.1 Gene:LOC1279385 / 1279385 VectorBaseID:AGAMI1_005914 Length:452 Species:Anopheles gambiae


Alignment Length:472 Identity:166/472 - (35%)
Similarity:238/472 - (50%) Gaps:90/472 - (19%)


- Green bases have known domain annotations that are detailed below.


  Fly    72 LLLLLLLGNCIDLTVSNKISSVGAF-----EPDFVIPLENVTIAQGRDATFTCVVNNLGGHRVSG 131
            |.|:||..:.:....::|..:..|.     ||:|...:||||:..||:....|.|.|||.:    
Mosquito    10 LFLMLLATSGVSSNTTSKTGTAPATNVVVEEPEFTDVIENVTVPAGRNVKLACSVKNLGSY---- 70

  Fly   132 DGSSAPAKVAWIKADAKAILAIHEHVITNNDRLSV---QHNDYNTWTLNIRGVKMEDAGKYMCQV 193
                   ||||:..:..|||.:|.||||.|.|:||   :|:.:.||.|:|..|:.||.|:||||:
Mosquito    71 -------KVAWMHFEQSAILTVHNHVITRNPRISVTHDKHDKHKTWFLHISNVQEEDKGRYMCQI 128

  Fly   194 NTDPMKMQTATLEVVIPPDIINEETSGDMMVPEGGSAKLVCRARGHPKPKITWRREDGREIIARN 258
            ||...|.|...|.||:||:|.:..:|.|::|.||.:..|.|||.|.|.|.:.|:|:|..:|    
Mosquito   129 NTVTAKTQFGYLHVVVPPNIDDSLSSSDVIVREGSNVTLKCRATGSPTPTVKWKRDDNSKI---- 189

  Fly   259 GSHQKTKAQSVEGEMLTLSKITRSEMGAYMCIASNGVPPTVSKRMKLQVHFHPLVQVPNQLVGAP 323
            ..::.......||..:.::||:|.:||||:||||||||||||||:|:.|.|.|::.:|:||||.|
Mosquito   190 AINRSLNVLEWEGNSIEITKISRLDMGAYLCIASNGVPPTVSKRIKVSVDFPPMLWIPHQLVGVP 254

  Fly   324 VLTDVTLICNVEASPKAINYWQRENGEMIIAGDRYALTEKENNM--YAIEMILHIKRLQSSDFGG 386
            :..:|||.|..||.|.::|||.||:|.||....:|. ||....|  |...|.|||..:|.:|:|.
Mosquito   255 LYFNVTLECFTEAHPTSLNYWTREDGHMIHDSKKYR-TESNVGMPIYKTHMRLHIYNIQQTDYGT 318

  Fly   387 YKCISKNSIGDTEGTIRLYEMERP----------------GKKILRD------------------ 417
            |||::||..|:|:||||||....|                ..:.|.|                  
Mosquito   319 YKCVAKNPRGETDGTIRLYTSTPPTTSPGPPTTESYSDLWSNRNLNDSAGGLPHHHGGQHSNSYS 383

  Fly   418 -----------DDLNEVSKNEVVQKDTR----SEDGSRNLNGRLYKDRAPDQHPASGSDQLLGRG 467
                       .:|||:.::|....||.    ..:.:||               ..|:.....|.
Mosquito   384 GHVVDKNSKYSSNLNEIDRSEQKSFDTNIIYWPPETNRN---------------NQGATTTTTRS 433

  Fly   468 TMRLIGTFLLALLVLFT 484
            |:.:|....:.||..|:
Mosquito   434 TLSIILNTSMLLLARFS 450

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
DIP-betaNP_001138225.1 Ig 98..209 CDD:472250 48/113 (42%)
Ig strand B 115..119 CDD:409353 0/3 (0%)
Ig strand C 139..143 CDD:409353 3/3 (100%)
Ig strand E 174..178 CDD:409353 2/3 (67%)
Ig strand F 188..193 CDD:409353 3/4 (75%)
Ig strand G 202..205 CDD:409353 0/2 (0%)
Ig 211..307 CDD:472250 42/95 (44%)
Ig strand B 230..234 CDD:409353 1/3 (33%)
Ig strand C 243..247 CDD:409353 0/3 (0%)
Ig strand E 272..276 CDD:409353 0/3 (0%)
Ig strand F 286..291 CDD:409353 3/4 (75%)
Ig strand G 300..303 CDD:409353 2/2 (100%)
IG_like 327..405 CDD:214653 38/79 (48%)
Ig strand B 328..332 CDD:409353 3/3 (100%)
Ig strand C 341..346 CDD:409353 3/4 (75%)
Ig strand E 365..376 CDD:409353 4/12 (33%)
Ig strand F 386..391 CDD:409353 3/4 (75%)
Ig strand G 399..402 CDD:409353 1/2 (50%)
LOC1279385XP_061513627.1 None

Return to query results.
Submit another query.