DRSC/TRiP Functional Genomics Resources

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Protein Alignment DIP-beta and Cd80

DIOPT Version :9

Sequence 1:NP_001138225.1 Gene:DIP-beta / 33125 FlyBaseID:FBgn0259245 Length:555 Species:Drosophila melanogaster
Sequence 2:XP_036015651.1 Gene:Cd80 / 12519 MGIID:101775 Length:314 Species:Mus musculus


Alignment Length:265 Identity:68/265 - (25%)
Similarity:102/265 - (38%) Gaps:69/265 - (26%)


- Green bases have known domain annotations that are detailed below.


  Fly   139 KVAWIKADAKAILAIHEHVITNNDRLSVQHN-----DYNTWTLNIRGVKMEDAGKYMCQVNTDPM 198
            ::.|.|.| |.:|:    ||....::..::.     |..|::|.|.|:.:.|.|.|.|.|    .
Mouse    75 RIYWQKHD-KVVLS----VIAGKLKVWPEYKNRTLYDNTTYSLIILGLVLSDRGTYSCVV----Q 130

  Fly   199 KMQTATLEV--------VIPPDII--NEETSGDMMVPEGGSAKLVCRAR-GHPKPKITWRREDGR 252
            |.:..|.||        .|..|..  |...||:   |...:.::.|.|. |.|||:.:| .|:||
Mouse   131 KKERGTYEVKHLALVKLSIK
ADFSTPNITESGN---PSADTKRITCFASGGFPKPRFSW-LENGR 191

  Fly   253 EIIARNGSHQKTKAQSVEGEMLTLS-----KITRSEMGAYMCIASNG-----------VPPTVSK 301
            |:...|    .|.:|..|.|:.|:|     ..||:.  ...|:...|           .||....
Mouse   192 ELPGIN----TTISQDPESELYTISSQLDFNTTRNH--TIKCLIKYGDAHVSEDFTWEKPPEDPP 250

  Fly   302 RMKLQVHFHPLVQVPNQLVGA---PVLTDVTLICNVEASPK-----AINYWQRENGEMIIAGDRY 358
            ..|     :.||     |.||   .|:|.|.::..::...|     ..|...||....:..|...
Mouse   251 DSK-----NTLV-----LFGAGFGAVITVVVIVVIIKCFCKHRSCFRRNEASRETNNSLTFGPEE 305

  Fly   359 ALTEK 363
            ||.|:
Mouse   306 ALAEQ 310

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
DIP-betaNP_001138225.1 I-set 98..209 CDD:254352 21/82 (26%)
ig 102..195 CDD:278476 17/60 (28%)
IG_like 219..307 CDD:214653 28/104 (27%)
Ig 221..307 CDD:299845 26/102 (25%)
Ig 311..404 CDD:299845 16/61 (26%)
IG_like 327..405 CDD:214653 9/42 (21%)
Cd80XP_036015651.1 IgV_CD80 47..150 CDD:319335 21/83 (25%)
Ig strand B 58..62 CDD:319335
Ig strand C 75..79 CDD:319335 0/3 (0%)
Ig strand E 110..114 CDD:319335 1/3 (33%)
Ig strand F 124..129 CDD:319335 2/4 (50%)
Ig strand G 142..145 CDD:319335 0/2 (0%)
IgC1_CD80 153..243 CDD:409505 26/99 (26%)
Ig strand B 169..173 CDD:409505 0/3 (0%)
Ig strand C 183..187 CDD:409505 1/4 (25%)
Ig strand E 213..217 CDD:409505 0/3 (0%)
Ig strand F 224..229 CDD:409505 1/4 (25%)
Ig strand G 237..240 CDD:409505 0/2 (0%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.910

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