DRSC/TRiP Functional Genomics Resources

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Protein Alignment DIP-beta and Dscaml1

DIOPT Version :9

Sequence 1:NP_001138225.1 Gene:DIP-beta / 33125 FlyBaseID:FBgn0259245 Length:555 Species:Drosophila melanogaster
Sequence 2:NP_001074739.2 Gene:Dscaml1 / 114873 MGIID:2150309 Length:2053 Species:Mus musculus


Alignment Length:529 Identity:115/529 - (21%)
Similarity:205/529 - (38%) Gaps:126/529 - (23%)


- Green bases have known domain annotations that are detailed below.


  Fly    84 LTVSNKISSVGAFEPDFVIPLENVTIAQGRDATFTCVVNNLGGHRVSGDGSSAPAKVAWIKADAK 148
            |::|..: .|....|..:.|.|....:.|:.....|||:       |||   .|.::.|.| |.:
Mouse   583 LSISQSV-HVAVKVPPLIQPFEFPPASIGQLLYIPCVVS-------SGD---MPIRITWRK-DGQ 635

  Fly   149 AILAIHEHVITNNDRLSVQHNDYNTWTLNIRGVKMEDAGKYMC-QVNTDPMKMQTATLEVVIPPD 212
                    ||.:...::::..::.: :|.|..|.::..|.|.| ..|......:...|.|.:||.
Mouse   636 --------VIISGSGVTIESKEFMS-SLQISSVSLKHNGNYTCIASNAAATVSRERQLIVRVPPR 691

  Fly   213 IINEETSGDMMVPEGGSAKLVCRARGHPKPKITWRREDGREIIARNGSHQK-------TKAQSVE 270
            .:.:..:.|.:.  |.:..|.|...|:|.||:.|:...|      :|:.|:       .:.|.:.
Mouse   692 FVVQPNNQDGIY--GKAGVLNCSVDGYPPPKVMWKHAKG------SGNPQQYHPVPLTGRIQILP 748

  Fly   271 GEMLTLSKITRSEMGAYMCIASNGVPPTVSKRMKLQVHFHPLVQVPNQLVGAPVLTDVTLICNVE 335
            ...|.:..:...::|.|:|.|||||...:||.|.|      .|::|..:...|..|     ..::
Mouse   749 NSSLLIRHVLEEDIGYYLCQASNGVGTDISKAMFL------TVKIPAMITSHPNTT-----IAIK 802

  Fly   336 ASPKAINYWQR---------ENGEMIIAGD---RYALTEKENNMYAIEMILHIKRLQSSDFGG-- 386
            ..||.:|...|         |.|:.:|..|   |||:..|:|.    :.::...:|:.:|.|.  
Mouse   803 GHPKELNCTARGERPIIIRWEKGDTVIDPDRVMRYAIATKDNG----DEVVSTLKLKPADRGDSV 863

  Fly   387 -YKCISKNSIGDTEGTIRLYEMERPGKKILRDDDLNEVSKNEVVQKDTRSEDG------------ 438
             :.|.:.||.|:..|.|:|...|.|....|   ::.||....:..:.|:..||            
Mouse   864 FFSCHAINSYGEDRGLIQLTVQEPPDPPEL---EIREVKARSMNLRWTQRFDGNSIITGFDIEYK 925

  Fly   439 -----------SRNLNGRLYKDRAPDQHPAS------GSDQLLGRGTMRLIGTFLLALLVLFTAL 486
                       :||::..:.:....|.||||      .|...:||....      ..|.:.....
Mouse   926 NKSDSWDFKQSTRNISPTINQANIVDLHPASVYSIRMYSFNKIGRSEPS------KELTISTEEA 984

  Fly   487 AEAGP---TTLSCRTKGGRQKKAKETSWNG--RRARDGREDGHAAEWRQCWERSALSWRRSAPPE 546
            |..||   .||...|     .::.:.:|..  :..::|...|:           .:.:|.::|..
Mouse   985 APDGPPMDVTLQPVT-----SQSIQVTWKAPKKELQNGVIRGY-----------QIGYRENSPGS 1033

  Fly   547 LDYYSLIQL 555
            ...||::::
Mouse  1034 NGQYSIVEM 1042

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
DIP-betaNP_001138225.1 I-set 98..209 CDD:254352 25/111 (23%)
ig 102..195 CDD:278476 21/93 (23%)
IG_like 219..307 CDD:214653 26/94 (28%)
Ig 221..307 CDD:299845 26/92 (28%)
Ig 311..404 CDD:299845 26/107 (24%)
IG_like 327..405 CDD:214653 22/92 (24%)
Dscaml1NP_001074739.2 IGc2 43..110 CDD:197706
Ig 125..218 CDD:353325
I-set 226..311 CDD:336764
Ig_3 317..389 CDD:339005
Ig 408..498 CDD:353325
IGc2 519..577 CDD:197706
Ig 615..681 CDD:319273 19/85 (22%)
Ig_DSCAM 707..785 CDD:143211 24/89 (27%)
Ig 803..891 CDD:353325 25/91 (27%)
FN3 887..981 CDD:238020 18/102 (18%)
FN3 988..1085 CDD:238020 12/71 (17%)
FN3 1093..1186 CDD:238020
FN3 1191..1282 CDD:238020
Ig 1307..1377 CDD:319273
FN3 1384..1474 CDD:238020
FN3 1488..1560 CDD:238020
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 1716..1741
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 1773..1803
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 1840..1862
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 1974..2053
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG3510
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
21.810

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