DRSC/TRiP Functional Genomics Resources

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Protein Alignment DIP-beta and CHL1

DIOPT Version :9

Sequence 1:NP_001138225.1 Gene:DIP-beta / 33125 FlyBaseID:FBgn0259245 Length:555 Species:Drosophila melanogaster
Sequence 2:NP_006605.2 Gene:CHL1 / 10752 HGNCID:1939 Length:1224 Species:Homo sapiens


Alignment Length:378 Identity:86/378 - (22%)
Similarity:129/378 - (34%) Gaps:104/378 - (27%)


- Green bases have known domain annotations that are detailed below.


  Fly    86 VSNKISSVGAFEPDFVIP------LENVTIAQGRDATFTCVV----------NNLGGHRVSGDGS 134
            :.:|.:|:...:|..::|      ..::||.:|......|..          |.:||....|..:
Human   239 IGSKANSIKQRKPKLLLPPTESGSESSITILKGEILLLECFAEGLPTPQVDWNKIGGDLPKGRET 303

  Fly   135 SAPAKVAWIKADAKAILAIHEHVITNNDRLSVQHNDYNTWTLNIRGVKMEDAGKYMCQVNTDPMK 199
            .                                 .:|.. ||.|..|..:|.|.|.|   |....
Human   304 K---------------------------------ENYGK-TLKIENVSYQDKGNYRC---TASNF 331

  Fly   200 MQTAT--LEVVI--PPDIINEETSGDMMVPEGGSAKLVCRARGHPKPKITWRREDGREIIARNGS 260
            :.|||  ..|::  ||....:..|.  :...|.:..|:|.|.|.|:|.|.||         .|||
Human   332 LGTATHDFHVIVEEPPRWTKKPQSA--VYSTGSNGILLCEAEGEPQPTIKWR---------VNGS 385

  Fly   261 ---HQKTKAQSVEGEMLTLSKITRSEMGAYMCIASNGVPPTVSKRMKLQ-VHFHPLVQVPN---- 317
               :.......|....::.:.:..:....|.|.||| |..|:.....:. |...||:|..:    
Human   386 PVDNHPFAGDVVFPREISFTNLQPNHTAVYQCEASN-VHGTILANANIDVVDVRPLIQTKDGENY 449

  Fly   318 -QLVGAPVLTDVTLICNVEASPKAINYWQRENGEMIIAGDRYALTEKENNMYAIEMILHIKRLQS 381
             .:||....    |.|...|||:|:..||:......:.|.||.:.|...        |.|.|...
Human   450 ATVVGYSAF----LHCEFFASPEAVVSWQKVEEVKPLEGRRYHIYENGT--------LQINRTTE 502

  Fly   382 SDFGGYKCISKNSIGDTEGTIRLYEMERPGKKILRDDDLNEVSKNEVVQKDTR 434
            .|.|.|.|..:|:||.|..|..|              |:...:|..|..|:.|
Human   503 EDAGSYSCWVENAIGKTAVTANL--------------DIRNATKLRVSPKNPR 541

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
DIP-betaNP_001138225.1 I-set 98..209 CDD:254352 24/128 (19%)
ig 102..195 CDD:278476 18/108 (17%)
IG_like 219..307 CDD:214653 22/91 (24%)
Ig 221..307 CDD:299845 21/89 (24%)
Ig 311..404 CDD:299845 29/97 (30%)
IG_like 327..405 CDD:214653 24/77 (31%)
CHL1NP_006605.2 Ig 55..126 CDD:299845
Ig2_L1-CAM_like 129..223 CDD:143253
IG_like 140..224 CDD:214653
IG_like 264..343 CDD:214653 22/115 (19%)
Ig3_L1-CAM_like 274..344 CDD:143208 19/106 (18%)
IG_like 353..434 CDD:214653 22/92 (24%)
Ig4_L1-NrCAM_like 361..435 CDD:143179 21/83 (25%)
IG_like 447..525 CDD:214653 26/89 (29%)
Ig 457..525 CDD:299845 24/79 (30%)
IG_like 548..624 CDD:214653
Ig 548..616 CDD:143165
DGEA 571..574
FN3 628..717 CDD:238020
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 709..732
fn3 731..811 CDD:278470
FN3 834..927 CDD:238020
FN3 932..1027 CDD:238020
Bravo_FIGEY 1120..1205 CDD:290593
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 1147..1179
FIG[AQ]Y 1197..1201
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 1205..1224
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR12231
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
User_Submission 00.000 Not matched by this tool.
11.100

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