DRSC/TRiP Functional Genomics Resources

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Protein Alignment DIP-beta and ntm

DIOPT Version :9

Sequence 1:NP_001138225.1 Gene:DIP-beta / 33125 FlyBaseID:FBgn0259245 Length:555 Species:Drosophila melanogaster
Sequence 2:XP_004916061.1 Gene:ntm / 100492453 XenbaseID:XB-GENE-6045425 Length:374 Species:Xenopus tropicalis


Alignment Length:316 Identity:97/316 - (30%)
Similarity:149/316 - (47%) Gaps:56/316 - (17%)


- Green bases have known domain annotations that are detailed below.


  Fly   104 LENVTIAQGRDATFTCVVNNLGGHRVSGDGSSAPAKVAWIKADAKAILAIHEHVITNNDRLSVQ- 167
            ::|||:.||..|...|.|:|    ||:        :|||:  :...||      .|.||:.|:. 
 Frog    43 MDNVTVRQGDSAILRCTVDN----RVT--------RVAWL--NRSTIL------YTGNDKWSIDP 87

  Fly   168 -----HNDYNTWTLNIRGVKMEDAGKYMCQVNTD--PMKMQTATLEVVIPPDIINEETSGDMMVP 225
                 .|..:.:::.|:.|.:.|.|.|.|.|.||  | |.....|.|.:||.|:  :.|..:.|.
 Frog    88 RVVLLANTKSQYSIEIQNVDIYDEGPYTCSVQTDNHP-KTSRVHLIVQVPPRIV--DISSSIAVN 149

  Fly   226 EGGSAKLVCRARGHPKPKITWRREDGREIIARNGSHQKTKAQSV--EGEMLTLSKITRSEMGAYM 288
            ||.:..|:|.|.|.|:|.:.||             :...||:..  |.|.|.::.|||.:.|.|.
 Frog   150 EGSNVSLICIANGRPEPVVNWR-------------YLSPKARGFVSEDEYLEITGITREQSGIYE 201

  Fly   289 CIASNGVPPTVSKRMKLQVHFHPLVQVPNQLVGAPVLTDVTLICNVEASPKAINYWQRENGEMII 353
            |.|||.|.....:|:||.|::.|.: :..|.:|||:.....|.|...|.|.|..:|.:|:..:  
 Frog   202 CSASNDVSAPDVRRVKLTVNYPPYI-LDAQNIGAPLGHRGILQCEASAVPAADFFWYKEDKRL-- 263

  Fly   354 AGDRYALTEKENNMYAIEMILHIKRLQSS--DFGGYKCISKNSIGDTEGTIRLYEM 407
             .|.:...:.||.    |.|..:..|..|  |:|.|.|::||.:|.:..:|.|:|:
 Frog   264 -SDSWRGVKVENR----ETISRVTFLNVSEQDYGNYTCMAKNLLGHSNASIILFEL 314

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
DIP-betaNP_001138225.1 I-set 98..209 CDD:254352 34/112 (30%)
ig 102..195 CDD:278476 28/96 (29%)
IG_like 219..307 CDD:214653 30/89 (34%)
Ig 221..307 CDD:299845 29/87 (33%)
Ig 311..404 CDD:299845 27/94 (29%)
IG_like 327..405 CDD:214653 22/79 (28%)
ntmXP_004916061.1 Ig 45..133 CDD:299845 33/108 (31%)
IG_like 45..133 CDD:214653 33/108 (31%)
IG_like 143..220 CDD:214653 30/89 (34%)
IGc2 150..209 CDD:197706 24/71 (34%)
ig 227..311 CDD:278476 26/90 (29%)
IG_like 230..311 CDD:214653 26/87 (30%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 1 1.000 58 1.000 Domainoid score I10578
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 138 1.000 Inparanoid score I4412
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D265311at33208
OrthoFinder 1 1.000 - - FOG0000150
OrthoInspector 1 1.000 - - otm47726
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X97
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
66.060

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