DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment DIP-beta and iglon5

DIOPT Version :9

Sequence 1:NP_001138225.1 Gene:DIP-beta / 33125 FlyBaseID:FBgn0259245 Length:555 Species:Drosophila melanogaster
Sequence 2:XP_002938252.1 Gene:iglon5 / 100488314 XenbaseID:XB-GENE-945713 Length:333 Species:Xenopus tropicalis


Alignment Length:327 Identity:91/327 - (27%)
Similarity:160/327 - (48%) Gaps:49/327 - (14%)


- Green bases have known domain annotations that are detailed below.


  Fly    99 DFVIPLENVTIAQGRDATFTCVVNNLGGHRVSGDGSSAPAKVAWIKADAKAILAIHEHVITNNDR 163
            :||.|.:|.|::||.:||.:|::::    :|:        :|||:  :...||...:...:.:.|
 Frog    28 EFVPPADNYTVSQGDNATLSCLIDD----KVT--------RVAWL--NRSNILYAGKDKWSIDSR 78

  Fly   164 LSVQHNDYNTWTLNIRGVKMEDAGKYMCQVNTDPMKMQTAT--LEVVIPPDIINEETSGDMMVPE 226
            :.:..|..:.:::.|..|.:.|.|.|.|...|:. |..|:.  |.|.:|..|:|  .|..:.|.|
 Frog    79 VQLLTNTKSEYSIVITHVDVADEGLYTCSFQTED-KPHTSQVYLIVQVPAKIVN--ISSSVTVNE 140

  Fly   227 GGSAKLVCRARGHPKPKITWRREDGREIIARNGSHQKTKAQSVEGEMLTLSKITRSEMGAYMCIA 291
            |.:..|.|.|.|.|:|.|||:              |.::..|.|||:|.:::|.|.:.|.|.|:.
 Frog   141 GSNVNLQCLAVGKPEPTITWQ--------------QLSEGFSSEGELLEITEINRQQAGDYECVT 191

  Fly   292 SNGVPPTVSKRMKLQVHFHP-LVQVPNQLVGAPVLTDVTLICNVEASPKAINYWQRENGEMIIAG 355
            ||||....:|::::.|::.| :..|.|  ..:||....||.|...|.|.|...|.::....:|:|
 Frog   192 SNGVSVPDTKKVQITVNYPPYITDVKN--AQSPVGRPATLRCKAMAVPPAEFEWYKDEKRRLISG 254

  Fly   356 DRYALTEKENNMYAIEMILHIKRLQSSDFGGYKCISKNSIGDTEGTIRLYEMERPGKKILRDDDL 420
            .. .|:.|..:.::   ::....:.|..:|.|.|::.|.:|....::||.   :||      |.|
 Frog   255 TE-GLSIKTESSWS---VIVFSNVTSRHYGNYTCLASNKLGSFNSSLRLL---KPG------DPL 306

  Fly   421 NE 422
            |:
 Frog   307 NQ 308

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
DIP-betaNP_001138225.1 I-set 98..209 CDD:254352 29/111 (26%)
ig 102..195 CDD:278476 22/92 (24%)
IG_like 219..307 CDD:214653 29/87 (33%)
Ig 221..307 CDD:299845 28/85 (33%)
Ig 311..404 CDD:299845 22/93 (24%)
IG_like 327..405 CDD:214653 18/77 (23%)
iglon5XP_002938252.1 Ig 31..123 CDD:299845 26/106 (25%)
IG_like 35..123 CDD:214653 25/102 (25%)
Ig 126..207 CDD:299845 32/96 (33%)
I-set 128..207 CDD:254352 31/94 (33%)
I-set 210..299 CDD:254352 22/94 (23%)
Ig 227..298 CDD:143165 17/74 (23%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 1 1.000 58 1.000 Domainoid score I10578
eggNOG 00.000 Not matched by this tool.
Hieranoid 1 1.000 - -
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 138 1.000 Inparanoid score I4412
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D265311at33208
OrthoFinder 1 1.000 - - FOG0000150
OrthoInspector 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X97
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
76.970

Return to query results.
Submit another query.