DRSC/TRiP Functional Genomics Resources

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Protein Alignment DIP-beta and pxdn

DIOPT Version :10

Sequence 1:NP_001138225.1 Gene:DIP-beta / 33125 FlyBaseID:FBgn0259245 Length:555 Species:Drosophila melanogaster
Sequence 2:XP_073783741.1 Gene:pxdn / 100332937 ZFINID:ZDB-GENE-140415-2 Length:1468 Species:Danio rerio


Alignment Length:367 Identity:88/367 - (23%)
Similarity:134/367 - (36%) Gaps:89/367 - (24%)


- Green bases have known domain annotations that are detailed below.


  Fly    98 PDFVIPLENVTIAQGRDATFTCVVNNLGGHRVSGDGSSAPAKVAWIKADAKAILAIHEHVITNND 162
            |.|||..:|..:..|...|..|          |..|...| :|.|.:.|..|:.......||.:.
Zfish   337 PSFVIQPQNTEVLVGESVTLEC----------SATGQPQP-RVTWTRGDQSALPVDPRINITPSG 390

  Fly   163 RLSVQHNDYNTWTLNIRGVKMEDAGKYMC--QVNTDPMKMQTATLEVVIPPDIINEETSGDMMVP 225
            .|.:|:            :...|.|:|.|  ..|.|.:......:....|...:   |..|..|.
Zfish   391 GLFIQN------------IHQADGGQYTCFASNNVDTIHANAYIIVQARPQFTV---TPQDQSVL 440

  Fly   226 EGGSAKLVCRARGHPKPKITWRR------EDGREIIARNGSHQKTKAQSVEGEMLTLSKITRSEM 284
            ||.:....|.|.|.|:|.|.|.|      .|.|.::...||             |.:|::...:.
Zfish   441 EGQTVDFPCEASGFPQPVIAWTRGGSPLPNDRRHVVLSTGS-------------LRISRVALHDQ 492

  Fly   285 GAYMCIASNGVPPTVSKRMKLQVHFHPLVQVPNQLVGAP-VLT-----DVTLICNVEASPKAINY 343
            |.|.|.|   |.|..:.|  ..||.:.|..|......|| .||     ||.:.|:.:..|..|..
Zfish   493 GQYECQA---VSPVGTAR--AAVHLNILQSVTPVFTSAPRDLTVESGSDVQIPCSAQGEPTPIIT 552

  Fly   344 WQR------ENGEMIIAGDRYALTEKENNMYAIEMILHIKRLQSSDFGGYKCISKNSIGDTEG-- 400
            |.:      |:|:..|..|.|               |.:..:..:|.|.|:|:::||||.:..  
Zfish   553 WSKDGVQITESGKFHINPDGY---------------LEVHDVGLADGGRYECVARNSIGYSSSSM 602

  Fly   401 --TIRLYEMERPGKKILRDDDLNEVSKNEVVQKDTRSEDGSR 440
              |:::.::.|.|      |.....|..|.::....:.|.:|
Zfish   603 VLTVQVPQVSREG------DPFVSTSLEEAIRSINSAIDSTR 638

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
DIP-betaNP_001138225.1 Ig 98..209 CDD:472250 25/112 (22%)
Ig strand B 115..119 CDD:409353 1/3 (33%)
Ig strand C 139..143 CDD:409353 1/3 (33%)
Ig strand E 174..178 CDD:409353 0/3 (0%)
Ig strand F 188..193 CDD:409353 2/6 (33%)
Ig strand G 202..205 CDD:409353 0/2 (0%)
Ig 211..307 CDD:472250 26/101 (26%)
Ig strand B 230..234 CDD:409353 0/3 (0%)
Ig strand C 243..247 CDD:409353 1/3 (33%)
Ig strand E 272..276 CDD:409353 1/3 (33%)
Ig strand F 286..291 CDD:409353 2/4 (50%)
Ig strand G 300..303 CDD:409353 0/2 (0%)
IG_like 327..405 CDD:214653 21/87 (24%)
Ig strand B 328..332 CDD:409353 1/3 (33%)
Ig strand C 341..346 CDD:409353 2/4 (50%)
Ig strand E 365..376 CDD:409353 1/10 (10%)
Ig strand F 386..391 CDD:409353 2/4 (50%)
Ig strand G 399..402 CDD:409353 0/6 (0%)
pxdnXP_073783741.1 None

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