DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment mst and Msto1

DIOPT Version :9

Sequence 1:NP_001285518.1 Gene:mst / 33119 FlyBaseID:FBgn0020272 Length:574 Species:Drosophila melanogaster
Sequence 2:XP_038957963.1 Gene:Msto1 / 295237 RGDID:1306110 Length:593 Species:Rattus norvegicus


Alignment Length:606 Identity:177/606 - (29%)
Similarity:278/606 - (45%) Gaps:64/606 - (10%)


- Green bases have known domain annotations that are detailed below.


  Fly     5 REILTFQFGTYANYVGTHFWNQQEANFRYGDESEQVAEEQLPNNDILYREGRNDLNRTTYTPRLL 69
            ||:||.|.|.:|.:||.|:||||:|......|.|:...|..|  |:|||.||....:.||||||:
  Rat     6 REVLTLQLGHFAGFVGAHWWNQQDAALGRTTEGEESPGELCP--DVLYRSGRTLHGQETYTPRLI 68

  Fly    70 SVDLSGTLGHLPVTGELYGNFVQRDEEL-LPLSTGEELEQVRKRAEE-----------SGVCSPE 122
            .:||.|:|..|...|.||     ||.:| ..::...:|...|:.|..           .||.|.:
  Rat    69 LMDLKGSLNTLKEEGSLY-----RDRQLEAAIAWQGKLTTHREEANSKNPNLQDLLSAEGVLSSD 128

  Fly   123 ---QLEVQEQSKASIS--------------EYQRDLLKNAVVPEKNYQLAATANS---WVDFLYA 167
               :.::.:..|...|              ...|..|..:........|..|.||   |.|||..
  Rat   129 GALRAKLIQNGKGETSLDAGHWTEKELGDGTTHRLFLPTSHPATNPKPLLPTENSIKVWSDFLRV 193

  Fly   168 RYHPRTLNVLPGLIRDPTAQALGTYSAGTEMWQEVSFNEEFCDRIRLYVEECDGLQGFHVLFDID 232
            ..|||::.|:.....|.....|..:..|..:.:|..:.||..||:..||||||.||||.:|.|:.
  Rat   194 HLHPRSICVIQKYNHDGETGRLEAFGQGESVLKEPRYLEELEDRLHFYVEECDYLQGFQILCDLH 258

  Fly   233 DGFGGLAGKCLEHLNDEYSR---ASFALPLHYPRITSYPQADTRLSHSIRVVNNVLGYHQLSEQA 294
            |||.|:..|..|.|.||||.   .::.| |..|.....||     .:..|::|...|...|:..:
  Rat   259 DGFSGVGAKTAELLQDEYSGRGVLTWGL-LPGPYSLGEPQ-----KNIYRLLNTAFGLVHLAGYS 317

  Fly   295 LMFTPLSTLETIWRNNNLKSR---SLPGLQWETDNLYQTSALLAAFFDTATLSYRLRQTPESLLR 356
            ....|||    :..|..|:.:   :.|.|.::....:..||:||...||.|:.||||.:..|:..
  Rat   318 SFVCPLS----LGGNLGLRPKPPVNFPYLHYDATLPFHCSAILATALDTVTVPYRLRSSTVSMAH 378

  Fly   357 FCECVTPAGRKMTAAGLALPFGLREGQDLIEFLDQSGDHALLTQLTP-GCEPGTSYVVQSVTARG 420
            ..:.::.:|:|:..|...:||.|..||.|.:.|.|.|:....|.|:. |...|.....|||..||
  Rat   379 LADVLSFSGKKVVTAEAIIPFPLVRGQSLPDILMQLGEATPWTSLSACGDSAGHRCFAQSVVLRG 443

  Fly   421 IPAERLKRPREL-AGDQLRMAAYSCDSISHMLQLYYQCTYHGSVTNAAATPLPLKTQLPFPYEMF 484
            |  :|.....:| .|..|....::|.|...:|..|.:..:...::::.....|.|...|:|:  |
  Rat   444 I--DRASHTSKLNPGTPLPSTLHACASGEEVLAQYLEQQHPRVLSSSYLLLTPCKMAPPYPH--F 504

  Fly   485 AAGISRDGYRLPEGAERETGSRVDSAPMLAAVQNSTKLGEHLDNVHAQSHRVQLAKLQAYSNSGL 549
            .:..|:.|..: :||.:  |:.|.|.|:..|:::::.|...|.::..:..|:.|.:..::.::|:
  Rat   505 FSSFSQKGLAM-DGAPK--GAAVQSIPVFGALRSTSSLQRTLRDLGDELARLDLRRWASFMDAGV 566

  Fly   550 ERDEYDTALDQLLEFRDLYAD 570
            |:|:.:..|.:|......|.:
  Rat   567 EQDDMEELLQELHSLAQCYQE 587

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
mstNP_001285518.1 misato 5..570 CDD:276964 177/604 (29%)
Msto1XP_038957963.1 misato 6..587 CDD:276964 177/604 (29%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C166351588
Domainoid 1 1.000 92 1.000 Domainoid score I7471
eggNOG 1 0.900 - - E1_KOG2530
Hieranoid 1 1.000 - -
Homologene 1 1.000 - - H41228
Inparanoid 1 1.050 215 1.000 Inparanoid score I3540
OMA 1 1.010 - - QHG48476
OrthoDB 1 1.010 - - D1321917at2759
OrthoFinder 1 1.000 - - FOG0005869
OrthoInspector 1 1.000 - - oto98410
orthoMCL 1 0.900 - - OOG6_103867
Panther 1 1.100 - - LDO PTHR13391
Phylome 1 0.910 - -
SonicParanoid 1 1.000 - - X4263
SwiftOrtho 1 1.000 - -
TreeFam 1 0.960 - -
1615.770

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