Protein Alignment Hlc and AT3G18600

DIOPT Version :9

• Sequence 1: NP_001285517.1
• Gene: Hlc / 33118
• FlyBaseID: FBgn0001565
• Length: 560
• Species: Drosophila melanogaster
• Sequence 2: NP_188490.1
• Gene: AT3G18600 / 821391
• AraportID: AT3G18600
• Length: 568
• Species: Arabidopsis thaliana
• Alignment Length: 564
• Identity: 143/564 - (25%)
• Similarity: 243/564 - (43%)
• Gaps: 109/564 - (19%)

  Fly     9 VQFHELELDQRILKAVAQLGWQQPTLIQSTAIPLLLEGKDVVVRARTGSGKTATYALPLIQKILN 73
            |.|..|:|.::...|:.::|:|..|.||:.:|..|||||||:..||||||||..:.:|.::.:..
plant    89 VTFDSLDLSEQTSIAIKEMGFQYMTQIQAGSIQPLLEGKDVLGAARTGSGKTLAFLIPAVELLFK 153

  Fly    74 SKLNASEQYVSAVVLAPTKELCRQSRKVIEQLVESCGKVVRVADIADSSNDTVTQRHALSESPDI 138
            .:. :.......:|:.||:||..|::.|.|:|::...:.|.:. |..::..:..||  ::...::
plant   154 ERF-SPRNGTGVIVICPTRELAIQTKNVAEELLKHHSQTVSMV-IGGNNRRSEAQR--IASGSNL 214

  Fly   139 VVATPANLLAYAEAGSVVDLKHVETLVVDEADLVFAYGYEKDFKRLIKHLPPIYQAVLVSATLTD 203
            |:|||..||.:.:.......||::.||:||||.:....:|:|..:::|.||...|..|.|||.|.
plant   215 VIATPGRLLDHLQNTKAFIYKHLKCLVIDEADRILEENFEEDMNKILKILPKTRQTALFSATQTS 279

  Fly   204 DVVRMKGLCLNNPVTLKLEE-PELVPQDQLSHQRILAEENDKPAILYALLKLRLIRGKSIIFVNS 267
            .|..:..:.|.:||.:.::: ...|..:.|.....:.....:..:|.:.||..|.: |.::|.::
plant   280 KVKDLARVSLTSPVHVDVDDGRRKVTNEGLEQGYCVVPSKQRLILLISFLKKNLNK-KIMVFFST 343

  Fly   268 IDRCYKVRLFLEQFGIR---ACVLNSELPANIRIHTISQFNKGTYDIIIASDEHHMEKPGGKSAT 329
               |..|:...|...|.   ...::..:..|.|..|...|.|....|::.:|
plant   344 ---CKSVQFHTEIMKISDVDVSDIHGGMDQNRRTKTFFDFMKAKKGILLCTD------------- 392

  Fly   330 NRKSPRSGDMESSASRGIDFQCVNNVINFDFPRDVTSYIHRAGRTARGNN-KGSVL--------- 384
                        .|:||:|...|:.:|.:|.|...|.||||.||||||.. ||..|
plant   393 ------------VAARGLDIPSVDWIIQYDPPDKPTEYIHRVGRTARGEGAKGKALLVLIPEELQ 445

  Fly   385 -------SFVSMKESKVNDSVEKKLCDSFAAQEGEQIIKNYQFKMEEVESFRYRAQDCWRAATRV 442
                   :.|.:||.:.|   ||:|.:..:|.| :.:.|:|        :....|:|.:||
plant   446 FIRYLKAAKVPVKELEFN---EKRLSNVQSALE-KCVAKDY--------NLNKLAKDAYRA---- 494

  Fly   443 AVHDTRIREIKIEILNCEKLKAFFEENKRDLQALRHDKPLRAIKVQSHLSDMPEYIVPKALKRVV 507
                      .:...|...||..|..::.||.|:          .:|.....|    ||....:.
plant   495 ----------YLSAYNSHSLKDIFNVHRLDLLAV----------AESFCFSSP----PKVNLNIE 535

  Fly   508 GTSSSPVGASEAKQPRQSAAKAAFERQVNDPLMASQVDFGKRRP 551
            .      ||.:.::.|:...:..|         :....:||..|
plant   536 S------GAGKVRKARKQQGRNGF---------SPYSPYGKSTP 564

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
Hlc	NP_001285517.1	P-loop_NTPase	11..220	CDD:304359	68/208 (33%)
		DEXDc	24..231	CDD:214692	65/207 (31%)
		HELICc	234..386	CDD:238034	39/171 (23%)
AT3G18600	NP_188490.1	SrmB	86..553	CDD:223587	139/542 (26%)

Information from Original Tools

Tool	Simple Score	Weighted Score	Original Tool Information
			BLAST Result	Score	Score Type	Cluster ID
Domainoid	0	0.000	Not matched by this tool.
eggNOG	0	0.000	Not matched by this tool.
Hieranoid	0	0.000	Not matched by this tool.
Homologene	0	0.000	Not matched by this tool.
Inparanoid	0	0.000	Not matched by this tool.
OMA	0	0.000	Not matched by this tool.
OrthoDB	1	1.010	-	-		D973872at2759
OrthoFinder	0	0.000	Not matched by this tool.
OrthoInspector	0	0.000	Not matched by this tool.
orthoMCL	0	0.000	Not matched by this tool.
Panther	0	0.000	Not matched by this tool.
Phylome	1	0.910	-	-
SonicParanoid	0	0.000	Not matched by this tool.
SwiftOrtho	0	0.000	Not matched by this tool.
TreeFam	0	0.000	Not matched by this tool.
	2	1.920