Sequence 1: | NP_001285517.1 | Gene: | Hlc / 33118 | FlyBaseID: | FBgn0001565 | Length: | 560 | Species: | Drosophila melanogaster |
---|---|---|---|---|---|---|---|---|---|
Sequence 2: | NP_001096151.1 | Gene: | ddx10 / 613047 | XenbaseID: | XB-GENE-985914 | Length: | 852 | Species: | Xenopus tropicalis |
Alignment Length: | 483 | Identity: | 126/483 - (26%) |
---|---|---|---|
Similarity: | 215/483 - (44%) | Gaps: | 94/483 - (19%) |
- Green bases have known domain annotations that are detailed below.
Fly 5 TQKTVQFHELELDQRILKAVAQLGWQQPTLIQSTAIPLLLEGKDVVVRARTGSGKTATYALPLIQ 69
Fly 70 KILNSKLNASEQYVSAVVLAPTKELCRQSRKVIEQLVE----SCGKVVRVADIADSSNDTVTQRH 130
Fly 131 ALSESPDIVVATPANLLAYAEAGSVVDLKHVETLVVDEADLVFAYGYEKDFKRLIKHLPPIYQAV 195
Fly 196 LVSATLTDDVVRMKGLCLNNP------VTLKLEEPELVPQDQLSHQRILAEENDKPAILYALLKL 254
Fly 255 RLIRGKSIIFVNSIDRCYKVRLFLEQF-----GIRACVLNSELPANIRIHTISQFNKGTYDIIIA 314
Fly 315 SDEHHMEKPGGKSATNRKSPRSGDMESSASRGIDFQCVNNVINFDFPRDVTSYIHRAGRTARGNN 379
Fly 380 KGSVL----------SFVSMKESKVNDSVEK----KLCD------SFAAQEGEQIIKNYQFKMEE 424
Fly 425 VESFRYRAQDCWRAATRVAVHDTRIREI 452 |
Gene | Sequence | Domain | Region | External ID | Identity |
---|---|---|---|---|---|
Hlc | NP_001285517.1 | P-loop_NTPase | 11..220 | CDD:304359 | 60/218 (28%) |
DEXDc | 24..231 | CDD:214692 | 60/216 (28%) | ||
HELICc | 234..386 | CDD:238034 | 43/166 (26%) | ||
ddx10 | NP_001096151.1 | SrmB | 52..564 | CDD:223587 | 126/483 (26%) |
60KD_IMP | <704..798 | CDD:321001 | |||
Blue background indicates that the domain is not in the aligned region. |
Tool | Simple Score | Weighted Score | Original Tool Information | |||
---|---|---|---|---|---|---|
BLAST Result | Score | Score Type | Cluster ID | |||
Compara | 0 | 0.000 | Not matched by this tool. | |||
Domainoid | 0 | 0.000 | Not matched by this tool. | |||
eggNOG | 0 | 0.000 | Not matched by this tool. | |||
Hieranoid | 0 | 0.000 | Not matched by this tool. | |||
Homologene | 0 | 0.000 | Not matched by this tool. | |||
Inparanoid | 0 | 0.000 | Not matched by this tool. | |||
OMA | 0 | 0.000 | Not matched by this tool. | |||
OrthoDB | 1 | 1.010 | - | - | D973872at2759 | |
OrthoFinder | 0 | 0.000 | Not matched by this tool. | |||
OrthoInspector | 0 | 0.000 | Not matched by this tool. | |||
Panther | 0 | 0.000 | Not matched by this tool. | |||
Phylome | 1 | 0.910 | - | - | ||
RoundUp | 0 | 0.000 | Not matched by this tool. | |||
SonicParanoid | 0 | 0.000 | Not matched by this tool. | |||
SwiftOrtho | 0 | 0.000 | Not matched by this tool. | |||
TreeFam | 0 | 0.000 | Not matched by this tool. | |||
2 | 1.920 |