DRSC/TRiP Functional Genomics Resources

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Protein Alignment Ddx56 and bel

DIOPT Version :10

Sequence 1:NP_523434.2 Gene:Ddx56 / 33118 FlyBaseID:FBgn0001565 Length:560 Species:Drosophila melanogaster
Sequence 2:NP_001262379.1 Gene:bel / 45826 FlyBaseID:FBgn0263231 Length:801 Species:Drosophila melanogaster


Alignment Length:442 Identity:117/442 - (26%)
Similarity:198/442 - (44%) Gaps:65/442 - (14%)


- Green bases have known domain annotations that are detailed below.


  Fly    11 FHELELDQRILKAVAQLGWQQPTLIQSTAIPLLLEGKDVVVRARTGSGKTATYALPLIQKIL--- 72
            |.:::|.:.|...||...:.:||.:|..|||:::.|:|::..|:|||||||.:.:|::.::.   
  Fly   297 FDDVQLTEIIRNNVALARYDKPTPVQKHAIPIIINGRDLMACAQTGSGKTAAFLVPILNQMYELG 361

  Fly    73 -------NSKLNASEQYVSAVVLAPTKELCRQSRKVIEQLVESCGKVVRVADIADSSNDTVTQRH 130
                   ..:.:..:||...:|||||:||..|   :.|:..:...:......:....|:|..|..
  Fly   362 HVPPPQSTRQYSRRKQYPLGLVLAPTRELATQ---IFEEAKKFAYRSRMRPAVLYGGNNTSEQMR 423

  Fly   131 ALSESPDIVVATPANLLAYAEAGSVVDLKHVETLVVDEADLVFAYGYEKDFKRLIKHL--PPI-- 191
            .|.....::||||..|......|. |.|:::..||:||||.:...|:|...:|:::.|  ||.  
  Fly   424 ELDRGCHLIVATPGRLEDMITRGK-VGLENIRFLVLDEADRMLDMGFEPQIRRIVEQLNMPPTGQ 487

  Fly   192 YQAVLVSATLTDDVVRMKGLCLNNPVTLKLEEPELVPQDQLSHQRILAEENDKPAILYALLKLRL 256
            .|.::.|||....:..:....|:|.:.|.:...... .:.::...:...|.||.:.|..||.  .
  Fly   488 RQTLMFSATFPKQIQELASDFLSNYIFLAVGRVGST-SENITQTILWVYEPDKRSYLLDLLS--S 549

  Fly   257 IR--------GKSIIFVNSIDRCYKVRLFLEQFGIRACVLNSELPANIRIHTISQFNKGTYDIII 313
            ||        ..::|||.:......:..||.|.......::.:.....|...:..|..|...|::
  Fly   550 IRDGPEYTKDSLTLIFVETKKGADSLEEFLYQCNHPVTSIHGDRTQKEREEALRCFRSGDCPILV 614

  Fly   314 ASDEHHMEKPGGKSATNRKSPRSGDMESSASRGIDFQCVNNVINFDFPRDVTSYIHRAGRTARGN 378
            |:                         :.|:||:|...|.:|||||.|.||..|:||.|||.|..
  Fly   615 AT-------------------------AVAARGLDIPHVKHVINFDLPSDVEEYVHRIGRTGRMG 654

  Fly   379 NKGSVLSFVSMKESKV-NDSVEKKLCDSFAAQEGEQIIKNYQFKMEEVESFR 429
            |.|...||.:.|...: :|.:|..:       |.:|.|.::   ||::.|.|
  Fly   655 NLGVATSFFNEKNRNICSDLLELLI-------ETKQEIPSF---MEDMSSDR 696

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Ddx56NP_523434.2 DEADc_DDX56 16..221 CDD:350719 63/218 (29%)
SF2_C_DEAD 232..387 CDD:350174 42/162 (26%)
belNP_001262379.1 DEADc_DDX3 275..522 CDD:350809 64/228 (28%)
SF2_C_DEAD 527..663 CDD:350174 42/162 (26%)

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