DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Hlc and bel

DIOPT Version :9

Sequence 1:NP_001285517.1 Gene:Hlc / 33118 FlyBaseID:FBgn0001565 Length:560 Species:Drosophila melanogaster
Sequence 2:NP_001262379.1 Gene:bel / 45826 FlyBaseID:FBgn0263231 Length:801 Species:Drosophila melanogaster


Alignment Length:442 Identity:117/442 - (26%)
Similarity:198/442 - (44%) Gaps:65/442 - (14%)


- Green bases have known domain annotations that are detailed below.


  Fly    11 FHELELDQRILKAVAQLGWQQPTLIQSTAIPLLLEGKDVVVRARTGSGKTATYALPLIQKIL--- 72
            |.:::|.:.|...||...:.:||.:|..|||:::.|:|::..|:|||||||.:.:|::.::.   
  Fly   297 FDDVQLTEIIRNNVALARYDKPTPVQKHAIPIIINGRDLMACAQTGSGKTAAFLVPILNQMYELG 361

  Fly    73 -------NSKLNASEQYVSAVVLAPTKELCRQSRKVIEQLVESCGKVVRVADIADSSNDTVTQRH 130
                   ..:.:..:||...:|||||:||..|   :.|:..:...:......:....|:|..|..
  Fly   362 HVPPPQSTRQYSRRKQYPLGLVLAPTRELATQ---IFEEAKKFAYRSRMRPAVLYGGNNTSEQMR 423

  Fly   131 ALSESPDIVVATPANLLAYAEAGSVVDLKHVETLVVDEADLVFAYGYEKDFKRLIKHL--PPI-- 191
            .|.....::||||..|......|. |.|:::..||:||||.:...|:|...:|:::.|  ||.  
  Fly   424 ELDRGCHLIVATPGRLEDMITRGK-VGLENIRFLVLDEADRMLDMGFEPQIRRIVEQLNMPPTGQ 487

  Fly   192 YQAVLVSATLTDDVVRMKGLCLNNPVTLKLEEPELVPQDQLSHQRILAEENDKPAILYALLKLRL 256
            .|.::.|||....:..:....|:|.:.|.:...... .:.::...:...|.||.:.|..||.  .
  Fly   488 RQTLMFSATFPKQIQELASDFLSNYIFLAVGRVGST-SENITQTILWVYEPDKRSYLLDLLS--S 549

  Fly   257 IR--------GKSIIFVNSIDRCYKVRLFLEQFGIRACVLNSELPANIRIHTISQFNKGTYDIII 313
            ||        ..::|||.:......:..||.|.......::.:.....|...:..|..|...|::
  Fly   550 IRDGPEYTKDSLTLIFVETKKGADSLEEFLYQCNHPVTSIHGDRTQKEREEALRCFRSGDCPILV 614

  Fly   314 ASDEHHMEKPGGKSATNRKSPRSGDMESSASRGIDFQCVNNVINFDFPRDVTSYIHRAGRTARGN 378
            |:                         :.|:||:|...|.:|||||.|.||..|:||.|||.|..
  Fly   615 AT-------------------------AVAARGLDIPHVKHVINFDLPSDVEEYVHRIGRTGRMG 654

  Fly   379 NKGSVLSFVSMKESKV-NDSVEKKLCDSFAAQEGEQIIKNYQFKMEEVESFR 429
            |.|...||.:.|...: :|.:|..:       |.:|.|.::   ||::.|.|
  Fly   655 NLGVATSFFNEKNRNICSDLLELLI-------ETKQEIPSF---MEDMSSDR 696

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
HlcNP_001285517.1 P-loop_NTPase 11..220 CDD:304359 63/222 (28%)
DEXDc 24..231 CDD:214692 61/220 (28%)
HELICc 234..386 CDD:238034 41/159 (26%)
belNP_001262379.1 DEADc 297..516 CDD:238167 63/222 (28%)
DEXDc 315..529 CDD:214692 59/218 (27%)
Helicase_C 538..654 CDD:278689 38/142 (27%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C45451566
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
10.930

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