Protein Alignment Ddx56 and ddx56

DIOPT Version :10

• Sequence 1: NP_523434.2
• Gene: Ddx56 / 33118
• FlyBaseID: FBgn0001565
• Length: 560
• Species: Drosophila melanogaster
• Sequence 2: NP_001003876.1
• Gene: ddx56 / 445399
• ZFINID: ZDB-GENE-040825-3
• Length: 557
• Species: Danio rerio
• Alignment Length: 568
• Identity: 280/568 - (49%)
• Similarity: 377/568 - (66%)
• Gaps: 26/568 - (4%)

  Fly     4 MTQKTVQFHELELDQRILKAVAQLGWQQPTLIQSTAIPLLLEGKDVVVRARTGSGKTATYALPLI 68
            |.:.:|:|||:.||.|:|||:|.|||.||||||..||||.|||||::.||||||||||.||:|||
Zfish     1 MEEDSVRFHEMGLDDRLLKALADLGWSQPTLIQEKAIPLALEGKDLLARARTGSGKTAAYAVPLI 65

  Fly    69 QKILNSKLNASEQYVSAVVLAPTKELCRQSRKVIEQLVESCGKVVRVADIADSSNDTVTQRHALS 133
            |::|.||....||.|.||||.|||||.:|.:.:|.||...|.:.||||||:..: |...|:..|.
Zfish    66 QRVLTSKQTVREQAVRAVVLVPTKELGQQVQTMIRQLTAYCSRDVRVADISGKA-DLSAQKPILM 129

  Fly   134 ESPDIVVATPANLLAYAEAGSVVDLKHVETLVVDEADLVFAYGYEKDFKRLIKHLPPIYQAVLVS 198
            |.|||||:||:.:.|:..|.::.....:|.||:|||||:|::|:|.|.|.|:.|||.||||.|:|
Zfish   130 EKPDIVVSTPSRIQAHINAQNLQLHSSLEMLVIDEADLLFSFGFEADLKNLLCHLPKIYQAFLMS 194

  Fly   199 ATLTDDVVRMKGLCLNNPVTLKLEEPELVPQDQLSHQRILAEENDKPAILYALLKLRLIRGKSII 263
            |||.|||..:|.|.|:|||||||:..:|....||....|..||.||..::|.:|||.||:||:::
Zfish   195 ATLNDDVQALKELVLHNPVTLKLQGSQLPDSSQLQQFSIKCEEEDKFLLIYTMLKLGLIQGKTLL 259

  Fly   264 FVNSIDRCYKVRLFLEQFGIRACVLNSELPANIRIHTISQFNKGTYDIIIASDEHHMEKPGGKS- 327
            ||:.:||.|:::||||||.|.|||||||||.:.|.|.|||||:|.|:.||||||..:|.|.|.|
Zfish   260 FVSDVDRSYRLKLFLEQFSIPACVLNSELPVHSRCHIISQFNQGFYNYIIASDEQGLESPAGSSQ 324

  Fly   328 ---ATNRKSPRSG----DMESSASRGIDFQCVNNVINFDFPRDVTSYIHRAGRTARGNNKGSVLS 385
               ...:|...:|    |.|...||||||..|:||||||||..|.|||||.|||||.:|.|:.||
Zfish   325 KTQEKGKKKKGTGKKGKDKEYGVSRGIDFHNVSNVINFDFPTSVESYIHRVGRTARADNPGTALS 389

  Fly   386 FVSMKESKVNDSVEKKLCDSFAAQEGEQIIKNYQFKMEEVESFRYRAQDCWRAATRVAVHDTRIR 450
            |:|..|..:...||..|    .......::|.|:|:|||:|.||||.:|..|:.|:.||.:.|::
Zfish   390 FISHAELSMLSEVENAL----TGDSNNCVLKPYEFRMEEIEGFRYRCRDGMRSVTKQAVKEARLK 450

  Fly   451 EIKIEILNCEKLKAFFEENKRDLQALRHDKPLRAIKVQSHLSDMPEYIVPKALKRVVGTSSSPVG 515
            |||.|:||.||||.:||:|.||||.|||||.|....::.|:.::|||::|.|||.:|    :|:.
Zfish   451 EIKQELLNSEKLKTYFEDNPRDLQLLRHDKDLHPAIIKPHMKNVPEYLIPTALKSLV----NPLN 511

  Fly   516 ASEAKQPRQSAA--KAAFERQV--NDPLMASQVDFGKRRPAHRRKKKA 559
            ....::..:|:.  .::|::..  .:||.:.:  :.|:|   |.:|||
Zfish   512 QRRKRKKVKSSGVMLSSFKKNYRGRNPLKSFR--YAKKR---RGEKKA 554

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
Ddx56	NP_523434.2	DEADc_DDX56	16..221	CDD:350719	117/204 (57%)
		SF2_C_DEAD	232..387	CDD:350174	88/162 (54%)
ddx56	NP_001003876.1	DEADc_DDX56	13..217	CDD:350719	117/204 (57%)
		SF2_C_DEAD	228..391	CDD:350174	88/162 (54%)