Protein Alignment Ddx56 and Rm62

DIOPT Version :10

• Sequence 1: NP_523434.2
• Gene: Ddx56 / 33118
• FlyBaseID: FBgn0001565
• Length: 560
• Species: Drosophila melanogaster
• Sequence 2: NP_524243.2
• Gene: Rm62 / 40739
• FlyBaseID: FBgn0003261
• Length: 719
• Species: Drosophila melanogaster
• Alignment Length: 428
• Identity: 125/428 - (29%)
• Similarity: 194/428 - (45%)
• Gaps: 53/428 - (12%)

  Fly     3 QMTQKTVQFHELELDQRILKAVAQLGWQQPTLIQSTAIPLLLEGKDVVVRARTGSGKTATYALPL 67
            |:......|.|:.|...::|.:.:.|::.||.||:...|:.:.|.:.|..|:||||||..|.||.
  Fly   275 QVPNPIQDFSEVHLPDYVMKEIRRQGYKAPTAIQAQGWPIAMSGSNFVGIAKTGSGKTLGYILPA 339

  Fly    68 IQKILNSKLNASEQYVSAVVLAPTKELCRQSRKVIEQLVESCGKVVRVADIADSSNDTV------ 126
            |..|.|.:.........|:|||||:||.:|.::|..:...|  ..||        |..|
  Fly   340 IVHINNQQPLQRGDGPIALVLAPTRELAQQIQQVATEFGSS--SYVR--------NTCVFGGAPK 394

  Fly   127 -TQRHALSESPDIVVATPANLLAYAEAGSVVDLKHVETLVVDEADLVFAYGYEKDFKRLIKHLPP 190
             .|...|....:||:|||..|:.:..||| .:||....||:||||.:...|:|...::::..:.|
  Fly   395 GGQMRDLQRGCEIVIATPGRLIDFLSAGS-TNLKRCTYLVLDEADRMLDMGFEPQIRKIVSQIRP 458

  Fly   191 IYQAVLVSATLTDDVVRMKGLCLNNPVTLKLEEPELVPQDQLSHQRILAEENDKPAILYALLK-- 253
            ..|.::.|||...:|.::....|.|.:.:.:...||.....:.....:.:|..|...|..||.
  Fly   459 DRQTLMWSATWPKEVKQLAEDFLGNYIQINIGSLELSANHNIRQVVDVCDEFSKEEKLKTLLSDI 523

  Fly   254 --LRLIRGKSIIFVNSIDRCYKVRLFLEQFGIRACVLNSELPANIRIHTISQFNKGTYDIIIASD 316
              .....||.||||.:..|...:..|:..||:|...::.:...:.|...:.:|..|..:|::|:|
  Fly   524 YDTSESPGKIIIFVETKRRVDNLVRFIRSFGVRCGAIHGDKSQSERDFVLREFRSGKSNILVATD 588

  Fly   317 EHHMEKPGGKSATNRKSPRSGDMESSASRGIDFQCVNNVINFDFPRDVTSYIHRAGRTARGNNKG 381
                                     .|:||:|...:..|||||:|::...||||.|||.|.|.||
  Fly   589 -------------------------VAARGLDVDGIKYVINFDYPQNSEDYIHRIGRTGRSNTKG 628

  Fly   382 SVLSFVSMKESKVNDSVEKKLCDSF--AAQEGEQIIKN 417
            :..:|.    :|.|....|.|.|..  |.||....::|
  Fly   629 TSFAFF----TKNNAKQAKALVDVLREANQEINPALEN 662

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
Ddx56	NP_523434.2	DEADc_DDX56	16..221	CDD:350719	67/211 (32%)
		SF2_C_DEAD	232..387	CDD:350174	43/158 (27%)
Rm62	NP_524243.2	DEAD-like_helicase_N	231..669	CDD:475120	125/428 (29%)