Protein Alignment Ddx56 and Dbp73D

DIOPT Version :10

• Sequence 1: NP_523434.2
• Gene: Ddx56 / 33118
• FlyBaseID: FBgn0001565
• Length: 560
• Species: Drosophila melanogaster
• Sequence 2: NP_476833.1
• Gene: Dbp73D / 39871
• FlyBaseID: FBgn0004556
• Length: 687
• Species: Drosophila melanogaster
• Alignment Length: 605
• Identity: 137/605 - (22%)
• Similarity: 250/605 - (41%)
• Gaps: 142/605 - (23%)

  Fly    16 LDQRILKAVAQLGWQQPTLIQSTAIPLLLEG---------KDVVVRARTGSGKTATYALPLIQKI 71
            |::...:|:.|:..::...:|...||.:||.         :|:.|.|.||||||..:|:|::| :
  Fly   144 LEKYTCQALKQMKIKRLFPVQKQVIPWILEAHAKPPPFRPRDICVSAPTGSGKTLAFAIPIVQ-L 207

  Fly    72 LNSKLNASEQYVSAVVLAPTKELCRQSRKVIEQLVESCGKVVRVADIADSSNDTVTQRHALSE-- 134
            |:.:::..   |.|:|:.|..||..|..:||.:|   |.|......:....:....::..|.|
  Fly   208 LSQRVDCK---VRALVVLPVAELALQVYRVISEL---CSKTELEVCLLSKQHKLEDEQEKLVEQY 266

  Fly   135 ------SPDIVVATPANLLAYAEAGSVVDLKHVETLVVDEADLVFAYGYEKDFKRLIKHL----- 188
                  ..||||.||..|:.:..|.....||.::.||:||||.:....::.....|..|:
  Fly   267 KGKYYSKADIVVTTPGRLVDHLHATKGFCLKSLKFLVIDEADRIMDAVFQNWLYHLDSHVKETTD 331

  Fly   189 --------PPIY---QA--------VLVSATLTDDVVRMKGL----------CLNNPV------- 217
                    |..|   ||        :|.||||:.|..:::.|          .|..||
  Fly   332 QLLAGTQAPLCYAELQASFGKQPHKLLFSATLSQDPEKLQDLRLFQPRLFATVLTMPVLKDATEE 396

  Fly   218 ---TLKLEEP-----ELVPQDQLSHQRILAEENDKPAILYALLKLRLIRGKSIIFVNSIDRC--- 271
               |..|.:|     ......:|:.|..:.|...||..::||:: :....:.:.|.||.|:.
  Fly   397 GADTEALTDPGQFVGRYTTPAELTEQYCVTELRLKPLTVFALVE-KYKWKRFLCFTNSSDQATRL 460

  Fly   272 -YKVRLFLEQFGIRACVLNSELPANIRIHTISQFNKGTYDIIIASDEHHMEKPGGKSATNRKSPR 335
             :.:::..:::..:...|:..|.|.:|...:..|..|..:.:|.||
  Fly   461 TFVLKVLFQKYSTKVSELSGNLSAKVRNERLRDFAAGKINGLICSD------------------- 506

  Fly   336 SGDMESSASRGIDFQCVNNVINFDFPRDVTSYIHRAGRTARGNNKGSVLSFVSMKESKVNDSVEK 400
                  :.:||||...|:.|::::.||.:|:||||.|||||...||:.::.::.::.    ::.|
  Fly   507 ------ALARGIDVADVDVVLSYETPRHITTYIHRVGRTARAGRKGTAVTVLTEQDM----TLFK 561

  Fly   401 KLCDSFAAQEGEQIIKNYQFKMEEVESFRYRAQDCWRAATRVAVHDTRIREIKIEILNCEKLKAF 465
            |:........||:|..:...:::....:            :.|:...|..::|      .|.:..
  Fly   562 KILSDANKGLGEEIHVSPDIEIQHAVEY------------KEALAGLRSEKVK------NKNQKM 608

  Fly   466 FEENKRDLQALRHDK-----PLRAIKVQSHLSDMPEYIVPKALKRVVGTSSSPVGASEAKQPRQS 525
            .|:|:...:||.|.|     .:|.:.:...|......||..:.|           :||.|..:..
  Fly   609 AEKNRVATKALIHKKQEETATVRPLTLMEKLQIKANEIVQSSKK-----------SSETKNSKTK 662

  Fly   526 AAKAAFE-RQVNDPLMASQV 544
            |.|..:: ::....::|.|:
  Fly   663 ADKTKYQPKETKKQIIAKQL 682

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
Ddx56	NP_523434.2	DEADc_DDX56	16..221	CDD:350719	68/265 (26%)
		SF2_C_DEAD	232..387	CDD:350174	40/158 (25%)
Dbp73D	NP_476833.1	DEADc_DDX51	149..381	CDD:350714	63/238 (26%)
		SrmB	150..631	CDD:440279	124/535 (23%)