Protein Alignment Ddx56 and Dbp45A

DIOPT Version :10

• Sequence 1: NP_523434.2
• Gene: Ddx56 / 33118
• FlyBaseID: FBgn0001565
• Length: 560
• Species: Drosophila melanogaster
• Sequence 2: NP_476927.1
• Gene: Dbp45A / 35917
• FlyBaseID: FBgn0010220
• Length: 521
• Species: Drosophila melanogaster
• Alignment Length: 595
• Identity: 143/595 - (24%)
• Similarity: 242/595 - (40%)
• Gaps: 128/595 - (21%)

  Fly    11 FHELELDQRILKAVAQLGWQQPTLIQSTAIPLLLEGKDVVVRARTGSGKTATYALPLIQKILNSK 75
            |..|.|...::|.:.:||.:..|.||...||.:|.|:|.:..|:||||||..:|||:::::
  Fly     9 FQILGLRPWLVKQLTKLGLKGATPIQQKCIPAILAGQDCIGAAKTGSGKTFAFALPILERL---- 69

  Fly    76 LNASEQYVS--AVVLAPTKELCRQSRKVIEQ-LVESCGKVVRVADIADSSNDTVTQRHALSESPD 137
               ||:.||  |:||.||.||..|   :.|| ||......|||. :.....|.:.:...|.:.|.
  Fly    70 ---SEEPVSHFALVLTPTHELAYQ---ISEQFLVAGQAMGVRVC-VVSGGTDQMVESQKLMQRPH 127

  Fly   138 IVVATPANLLAYAEAGSVVDLKHVETLVVDEADLVFAYGYEKDFKRLIKHLPPIYQAVLVSATLT 202
            ||||.|..|..:..........:::.|||||||.:....:::....:.:.||...|.:..|||:.
  Fly   128 IVVAMPGRLADHLTGCDTFSFDNLKYLVVDEADRMLNGDFDESLSIIERCLPKTRQNLFFSATMK 192

  Fly   203 DDVVRMKGLCLNNPVTLKLEEPELVPQDQLSHQRILAEENDKPAILY-ALLKLRLIRGKS--IIF 264
            |.:.......:.:......::.::...:.|..:.:|..:.|:..:|. ||.|.|.....:  :||
  Fly   193 DFIKESSIFPIASDCFEWSQDSDVATVETLDQRYLLCADYDRDMVLIEALRKYREENENANVMIF 257

  Fly   265 VNSIDRCYKVRLFLEQFGIRACVLNSELPANIRIHTISQFNKGTYDIIIASDEHHMEKPGGKSAT 329
            .|:...|..:.:.|:...|....|:..:....|:..:|:|.......:||:|
  Fly   258 TNTKKYCQLLSMTLKNMEIDNVCLHGFMRQKERVAALSRFKSNQIRTLIATD------------- 309

  Fly   330 NRKSPRSGDMESSASRGIDFQCVNNVINFDFPRDVTSYIHRAGRTARGNNKGSVLS--------- 385
                        .|:||:|...|..|:|...||....||||.|||||...||..:|
  Fly   310 ------------VAARGLDIPSVELVMNHMLPRTPKEYIHRVGRTARAGRKGMSISIFRFPRDLE 362

  Fly   386 FVSMKESKVNDS-----VEKKLCDSFAAQ------EGEQIIKNYQFKMEEVESFRYRAQDCWRAA 439
            .::..|.::|..     :::::.:....|      |.|..:.|..|. |..:::|.:
  Fly   363 LLAAIEEEINTKLTEHPIDQRMVERIFMQVNVTRRESEMQLDNNDFD-ERAQNYRRK-------- 418

  Fly   440 TRVAVHDTRIREIKIEILNCEKLKAFFEENKRD-LQALRHDKPLRAIKVQSHLSDMPEYIVPKAL 503
                   |.|.|.|    :.::::|.:.:.::| |:.:|..:.|:
  Fly   419 -------TWIMEGK----DPDQMEALYRKKQKDKLREIRRKRKLQ-------------------- 452

  Fly   504 KRVVGTSSSPVGASEAKQPRQ-----SAAKAAFERQVNDPLMASQVD--------FGKRRP---- 551
                  .:.|..:.|.|...|     |...|.||::......|:|.|        ..|.:|
  Fly   453 ------HAEPAASEEGKALLQDERFKSVDSARFEKKGKGRSRATQEDTPTKPLKRLNKEKPVAQK 511

  Fly   552 --AHRRKKKA 559
              |..:|.||
  Fly   512 GRADVKKDKA 521

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
Ddx56	NP_523434.2	DEADc_DDX56	16..221	CDD:350719	64/207 (31%)
		SF2_C_DEAD	232..387	CDD:350174	42/166 (25%)
Dbp45A	NP_476927.1	SrmB	9..381	CDD:440279	110/407 (27%)