Protein Alignment Hlc and Hel25E

DIOPT Version :9

• Sequence 1: NP_001285517.1
• Gene: Hlc / 33118
• FlyBaseID: FBgn0001565
• Length: 560
• Species: Drosophila melanogaster
• Sequence 2: NP_723089.1
• Gene: Hel25E / 33781
• FlyBaseID: FBgn0014189
• Length: 424
• Species: Drosophila melanogaster
• Alignment Length: 396
• Identity: 100/396 - (25%)
• Similarity: 183/396 - (46%)
• Gaps: 40/396 - (10%)

  Fly    11 FHELELDQRILKAVAQLGWQQPTLIQSTAIPLLLEGKDVVVRARTGSGKTATYALPLIQKILNSK 75
            |.:..|...||:|:...|::.|:.:|...||..:.|.|::.:|::|.||||.:.|..:|::..|.
  Fly    43 FRDFLLKPEILRAIVDCGFEHPSEVQHECIPQAVLGMDILCQAKSGMGKTAVFVLATLQQLEPSD 107

  Fly    76 LNASEQYVSAVVLAPTKELCRQSRKVIEQLVESCGKVVRVADIADSSNDTVTQRHALSESPDIVV 140
            .|...    .:|:..|:||..|..|..|:..:.. ..|:||...........:....|.:|.|||
  Fly   108 NNTCH----VLVMCHTRELAFQISKEYERFSKYM-PTVKVAVFFGGMAIQKDEETLKSGTPHIVV 167

  Fly   141 ATPANLLAYAEAGSVVDLKHVETLVVDEAD-LVFAYGYEKDFKRLIKHLPPIYQAVLVSATLTDD 204
            .||..:||... ...::||.::..|:||.| ::......:|.:.:.:..|...|.::.||||:.|
  Fly   168 GTPGRILALIR-NKKLNLKLLKHFVLDECDKMLEQLDMRRDVQEIFRSTPHGKQVMMFSATLSKD 231

  Fly   205 VVRMKGLC---LNNPVTLKLEEPELVPQDQLSHQRILAEENDKPAILYALLKLRLIRGKSIIFVN 266
            :   :.:|   :.:|:.:.:::...:....|....:..:||:|...|:.||.: |...:.:|||.
  Fly   232 I---RPVCKKFMQDPMEVYVDDEAKLTLHGLQQHYVNLKENEKNKKLFELLDV-LEFNQVVIFVK 292

  Fly   267 SIDRCYKVRLFLEQFGIRACVLNSELPANIRIHTISQFNKGTYDIIIASDEHHMEKPGGKSATNR 331
            |:.||..:...|.:....|..::..:....|::...||......|::|:
  Fly   293 SVQRCVALSQLLTEQNFPAIGIHRGMTQEERLNRYQQFKDFQKRILVAT---------------- 341

  Fly   332 KSPRSGDMESSASRGIDFQCVNNVINFDFPRDVTSYIHRAGRTARGNNKGSVLSFVS-MKESKVN 395
                     :...||:|.:.||.|.|:|.|.|..:|:||..|..|...||..::||| ..::|:.
  Fly   342 ---------NLFGRGMDIERVNIVFNYDMPEDSDTYLHRVARAGRFGTKGLAITFVSDENDAKIL 397

  Fly   396 DSVEKK 401
            :.|:.:
  Fly   398 NEVQDR 403

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
Hlc	NP_001285517.1	P-loop_NTPase	11..220	CDD:304359	57/212 (27%)
		DEXDc	24..231	CDD:214692	52/210 (25%)
		HELICc	234..386	CDD:238034	37/151 (25%)
Hel25E	NP_723089.1	DEADc_DDX39	40..248	CDD:350708	57/213 (27%)
		SF2_C_DEAD	259..388	CDD:350174	38/154 (25%)

Information from Original Tools

Tool	Simple Score	Weighted Score	Original Tool Information
			BLAST Result	Score	Score Type	Cluster ID
Compara	1	0.930	-	-		C45451362
Domainoid	0	0.000	Not matched by this tool.
eggNOG	0	0.000	Not matched by this tool.
Homologene	0	0.000	Not matched by this tool.
Inparanoid	0	0.000	Not matched by this tool.
Isobase	0	0.000	Not matched by this tool.
OMA	0	0.000	Not matched by this tool.
OrthoDB	0	0.000	Not matched by this tool.
OrthoFinder	0	0.000	Not matched by this tool.
OrthoInspector	0	0.000	Not matched by this tool.
orthoMCL	0	0.000	Not matched by this tool.
Panther	0	0.000	Not matched by this tool.
Phylome	0	0.000	Not matched by this tool.
RoundUp	0	0.000	Not matched by this tool.
SonicParanoid	0	0.000	Not matched by this tool.
	1	0.930