Protein Alignment Hlc and Ddx51

DIOPT Version :9

• Sequence 1: NP_001285517.1
• Gene: Hlc / 33118
• FlyBaseID: FBgn0001565
• Length: 560
• Species: Drosophila melanogaster
• Sequence 2: XP_006249623.2
• Gene: Ddx51 / 304570
• RGDID: 1309580
• Length: 635
• Species: Rattus norvegicus
• Alignment Length: 466
• Identity: 111/466 - (23%)
• Similarity: 192/466 - (41%)
• Gaps: 108/466 - (23%)

  Fly    35 IQSTAIPLLLEG--------------KDVVVRARTGSGKTATYALPLIQKILNSKLNASEQYVSA 85
            :|:..||.|||.              .|:.|.|.||||||..:.:|::|.:|:..:    .::.|
  Rat   192 VQAAVIPALLESADNGFLVGRGGYQPSDLCVSAPTGSGKTLAFVIPVVQALLHRVV----CHIRA 252

  Fly    86 VVLAPTKELCRQSRKVIEQLVESCGKVVRVADIADSSNDTVTQRHALSES-------PDIVVATP 143
            :|:.|||||.:|..||.....::  ..:|||.:....:....|...:.::       .|||||||
  Rat   253 LVVLPTKELAQQVSKVFNIYTDT--TPLRVALVTGQKSLAKEQESLVQKTADGFCCLADIVVATP 315

  Fly   144 ANLLAYAEAGSVVDLKHVETLVVDEAD-------------LVFAYGYEKD--------------- 180
            ..|:.:.:......|:.:..|::||||             :|.|..|.:|
  Rat   316 GRLVDHIDQTPGFSLQQLRFLIIDEADRMIDSMHQSWLPRVVAAAFYTEDPTGSCALLQRTQPQA 380

  Fly   181 ---FKRLIKHLPPIYQAVLVSATLTDDVVRMKGLCLNNPVTLKLEEPELVPQDQ----------- 231
               ....|..:|  .|.:|.|||||.:..:::.|.|..|...........|:|.
  Rat   381 VTAASTCIPQMP--LQKLLFSATLTQNPEKLQRLGLYQPRLFSTRLGHQSPRDTVEVDENLGKYT 443

  Fly   232 ----LSHQRILAEENDKPAILYALLKLRLIRGKSIIFVNSIDRCYKVRLFLEQF-GIRACVLNSE 291
                |:|..:....:.||.|::.|: |.:...:::.|.||.:..:::.|..:.| |:.....:|.
  Rat   444 FPVGLTHHYVPCRLSSKPLIVFHLV-LGMNFSRALCFTNSRENSHRLFLLAQAFGGVSVAEFSSR 507

  Fly   292 LPANIRIHTISQFNKGTYDIIIASDEHHMEKPGGKSATNRKSPRSGDMESSASRGIDFQCVNNVI 356
            .....|...:.||.:|...::|::|                         :.:||||.|.|..||
  Rat   508 YGPGQRKKILKQFEQGKIQLLISTD-------------------------ATARGIDVQGVELVI 547

  Fly   357 NFDFPRDVTSYIHRAGRTARGNNKGSVLS-FVSMKESKVNDSVEKKLCDSFAAQEG-----EQII 415
            |:|.|:.:.:|:||.|||||....|...: .:.::|.|....|.:......|..|.     :.::
  Rat   548 NYDAPQYLRTYVHRVGRTARAGKTGQAFTLLLKVQERKFLQMVSEAGVPELACHEVPRKLLQPLV 612

  Fly   416 KNYQFKMEEVE 426
            ..|:..:.::|
  Rat   613 ARYETALSQLE 623

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
Hlc	NP_001285517.1	P-loop_NTPase	11..220	CDD:304359	62/236 (26%)
		DEXDc	24..231	CDD:214692	63/247 (26%)
		HELICc	234..386	CDD:238034	39/153 (25%)
Ddx51	XP_006249623.2	PRK01297	77..612	CDD:234938	109/453 (24%)
		DEADc_DDX51	177..421	CDD:350714	62/236 (26%)

Information from Original Tools

Tool	Simple Score	Weighted Score	Original Tool Information
			BLAST Result	Score	Score Type	Cluster ID
Compara	0	0.000	Not matched by this tool.
Domainoid	0	0.000	Not matched by this tool.
eggNOG	0	0.000	Not matched by this tool.
Hieranoid	0	0.000	Not matched by this tool.
Homologene	0	0.000	Not matched by this tool.
Inparanoid	0	0.000	Not matched by this tool.
OMA	0	0.000	Not matched by this tool.
OrthoDB	1	1.010	-	-		D973872at2759
OrthoFinder	0	0.000	Not matched by this tool.
OrthoInspector	0	0.000	Not matched by this tool.
orthoMCL	0	0.000	Not matched by this tool.
Panther	0	0.000	Not matched by this tool.
Phylome	0	0.000	Not matched by this tool.
SonicParanoid	0	0.000	Not matched by this tool.
SwiftOrtho	0	0.000	Not matched by this tool.
TreeFam	0	0.000	Not matched by this tool.
	1	1.010