Protein Alignment Ddx56 and Ddx56

DIOPT Version :10

• Sequence 1: NP_523434.2
• Gene: Ddx56 / 33118
• FlyBaseID: FBgn0001565
• Length: 560
• Species: Drosophila melanogaster
• Sequence 2: NP_001401918.1
• Gene: Ddx56 / 289780
• RGDID: 1303195
• Length: 546
• Species: Rattus norvegicus
• Alignment Length: 563
• Identity: 263/563 - (46%)
• Similarity: 364/563 - (64%)
• Gaps: 39/563 - (6%)

  Fly     6 QKTVQFHELELDQRILKAVAQLGWQQPTLIQSTAIPLLLEGKDVVVRARTGSGKTATYALPLIQK 70
            |:.:.|..:.||.|:|:||..|||.:|||||..||||.|||||::.||||||||||.||:|::|.
  Rat     4 QEALGFEHMGLDPRLLQAVTDLGWSRPTLIQEKAIPLALEGKDLLARARTGSGKTAAYAIPMLQL 68

  Fly    71 ILNSKLN--ASEQYVSAVVLAPTKELCRQSRKVIEQLVESCGKVVRVADIADSSNDTVTQRHALS 133
            :|:.|..  ..||.|..:||.|||||.||::.:|:||...|.:.||||::: ::.|:.:||..|.
  Rat    69 LLHKKATGPVMEQAVRGLVLVPTKELARQAQSMIQQLASYCARDVRVANVS-AAEDSASQRAVLM 132

  Fly   134 ESPDIVVATPANLLAYAEAGSVVDLKHVETLVVDEADLVFAYGYEKDFKRLIKHLPPIYQAVLVS 198
            |.||:||.||:.:|.:.:..::.....:|.||||||||:|::|:|.:.|.|:.|||.||||.|:|
  Rat   133 EKPDVVVGTPSRILNHLQQKNLKLRDSLELLVVDEADLLFSFGFEDELKSLLCHLPRIYQAFLMS 197

  Fly   199 ATLTDDVVRMKGLCLNNPVTLKLEEPELVPQDQLSHQRILAE-ENDKPAILYALLKLRLIRGKSI 262
            ||..:||..:|.|.|:|||||||:|.:|...|||...:::.| |.||..:|||||||.|||||::
  Rat   198 ATFNEDVQTLKELVLHNPVTLKLQESQLPGPDQLQQFQVVCETEEDKFLLLYALLKLSLIRGKAL 262

  Fly   263 IFVNSIDRCYKVRLFLEQFGIRACVLNSELPANIRIHTISQFNKGTYDIIIASDEHHM--EKPGG 325
            :|||:::|.|::|||||||.|.:||||.|||...|.|.|||||:|.||.:||:|...:  :....
  Rat   263 LFVNTLERGYRLRLFLEQFSIPSCVLNGELPLRSRCHIISQFNQGLYDCVIATDAEILGPQVKAK 327

  Fly   326 KSATNRKSPRSGDMESSASRGIDFQCVNNVINFDFPRDVTSYIHRAGRTARGNNKGSVLSFVSMK 390
            :.....|..::.|.||..:|||||..|:.|:|||.|....:|:||||||||.||.|.||:||...
  Rat   328 RQGRGSKGDKASDPESGVARGIDFHHVSAVLNFDLPPTAEAYVHRAGRTARANNPGIVLTFVLPT 392

  Fly   391 ESKVNDSVEKKLCDSFAAQEGE-QIIKNYQFKMEEVESFRYRAQDCWRAATRVAVHDTRIREIKI 454
            |......:|:.|     :.||: .|:..|||:|||:||||||.:|..|:.|:.|:.:.|::|||.
  Rat   393 EQSSLGKIEELL-----SGEGQAPILLPYQFQMEEIESFRYRCRDAMRSVTKQAIREARLKEIKE 452

  Fly   455 EILNCEKLKAFFEENKRDLQALRHDKPLRAIKVQSHLSDMPEYIVPKALKRVVGTSSSPVGASEA 519
            |:|:.||||.:||:|.||||.||||.||....|:.||.::|:|:||.||:.:|
  Rat   453 ELLHSEKLKTYFEDNPRDLQLLRHDLPLHPAVVKPHLGNVPDYLVPAALRGLV------------ 505

  Fly   520 KQPRQSAAKAAFER-----QVNDPLMASQVDFGKRRPAHRRKK 557
             .||:...|..|.|     :..:||.    ||     .||.||
  Rat   506 -HPRKKRRKMPFSRKAKKVKTQNPLR----DF-----KHRGKK 538

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
Ddx56	NP_523434.2	DEADc_DDX56	16..221	CDD:350719	106/206 (51%)
		SF2_C_DEAD	232..387	CDD:350174	79/157 (50%)
Ddx56	NP_001401918.1	PRK11634	9..>429	CDD:236941	210/425 (49%)
		DEADc_DDX56	14..220	CDD:350719	107/207 (52%)