Protein Alignment Ddx56 and vas

DIOPT Version :10

• Sequence 1: NP_523434.2
• Gene: Ddx56 / 33118
• FlyBaseID: FBgn0001565
• Length: 560
• Species: Drosophila melanogaster
• Sequence 2: NP_723899.1
• Gene: vas / 26067080
• FlyBaseID: FBgn0283442
• Length: 661
• Species: Drosophila melanogaster
• Alignment Length: 413
• Identity: 103/413 - (24%)
• Similarity: 182/413 - (44%)
• Gaps: 72/413 - (17%)

  Fly     2 SQMTQKTVQFHELELDQRILKAVAQLGWQQPTLIQSTAIPLLLEGKDVVVRARTGSGKTATYALP 66
            |.:.|....|...:|...|:..|.:.|::.||.||..:||::..|:|::..|:|||||||.:.||
  Fly   238 SDVPQPIQHFTSADLRDIIIDNVNKSGYKIPTPIQKCSIPVISSGRDLMACAQTGSGKTAAFLLP 302

  Fly    67 LIQKILNSKLNASEQYVSAVVLAPTKELC----RQSRKVIEQLVESCGKVVRVADIADSSNDTVT 127
            ::.|:|.............|:::||:||.    .::||.   ..||..|:    .|.........
  Fly   303 ILSKLLEDPHELELGRPQVVIVSPTRELAIQIFNEARKF---AFESYLKI----GIVYGGTSFRH 360

  Fly   128 QRHALSESPDIVVATPANLLAYAEAGSVVDLKHVETLVVDEADLVFAYGYEKDFKRLIKH--LPP 190
            |...::....:|:|||..||.:.:. :.:..:....:|:||||.:...|:.:|.:|::.|  :.|
  Fly   361 QNECITRGCHVVIATPGRLLDFVDR-TFITFEDTRFVVLDEADRMLDMGFSEDMRRIMTHVTMRP 424

  Fly   191 IYQAVLVSATLTDDVVRMKGLCLNNPVTLKL---------------EEPELVPQDQLSHQRILAE 240
            .:|.::.|||..:::.||.|..|.|.|.:.:               |..:...:.:|.  .||:|
  Fly   425 EHQTLMFSATFPEEIQRMAGEFLKNYVFVAIGIVGGACSDVKQTIYEVNKYAKRSKLI--EILSE 487

  Fly   241 ENDKPAILYALLKLRLIRGKSIIFVNSIDRCYKVRLFLEQFGIRACVLNSELPANIRIHTISQFN 305
            :.|                .:|:||.:......:..||.:.......::.:...:.|...:..|.
  Fly   488 QAD----------------GTIVFVETKRGADFLASFLSEKEFPTTSIHGDRLQSQREQALRDFK 536

  Fly   306 KGTYDIIIASDEHHMEKPGGKSATNRKSPRSGDMESSASRGIDFQCVNNVINFDFPRDVTSYIHR 370
            .|:..::||:                         |.||||:|.:.:.:|||:|.|..:..|:||
  Fly   537 NGSMKVLIAT-------------------------SVASRGLDIKNIKHVINYDMPSKIDDYVHR 576

  Fly   371 AGRTARGNNKGSVLSFVSMKESK 393
            .|||.|..|.|...||...::.:
  Fly   577 IGRTGRVGNNGRATSFFDPEKDR 599

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
Ddx56	NP_523434.2	DEADc_DDX56	16..221	CDD:350719	62/210 (30%)
		SF2_C_DEAD	232..387	CDD:350174	36/154 (23%)
vas	NP_723899.1	SrmB	247..617	CDD:440279	101/404 (25%)