Protein Alignment Ddx56 and C24H12.4

DIOPT Version :10

• Sequence 1: NP_523434.2
• Gene: Ddx56 / 33118
• FlyBaseID: FBgn0001565
• Length: 560
• Species: Drosophila melanogaster
• Sequence 2: NP_740966.1
• Gene: C24H12.4 / 173432
• WormBaseID: WBGene00016073
• Length: 634
• Species: Caenorhabditis elegans
• Alignment Length: 562
• Identity: 210/562 - (37%)
• Similarity: 329/562 - (58%)
• Gaps: 46/562 - (8%)

  Fly    11 FHELELDQRILKAVAQLGWQQPTLIQSTAIPLLLEGKDVVVRARTGSGKTATYALPLIQKIL-NS 74
            |.:..||:||||::.:|||::...:|.:.|.|.||.|:::.|||||||||..:.:||:||:: .|
 Worm    91 FADFGLDERILKSIGELGWEKANQVQESVISLALENKNIMGRARTGSGKTGAFLIPLVQKLIAES 155

  Fly    75 KLNASEQYVSAVVLAPTKELCRQSRKVIEQLVESCG--KVVRVADIADSSNDTVTQRHALSESPD 137
            |.|......|||::||||||..|..|:..:|.::..  :.:.:.||.:..|..     .|.:...
 Worm   156 KTNDGSVGPSAVIIAPTKELITQIYKLFVKLSQALPFLQAINLCDINEEENSV-----WLEDRSH 215

  Fly   138 IVVATPANLLAYAEAGSVVDLKH-----VETLVVDEADLVFAYGYEKDFKRLIKHLPPIYQAVLV 197
            :||.||..||      .:..|:.     |..||:|||||:.::|||::..::...|||.||.::.
 Worm   216 VVVTTPGKLL------RMCSLRPEYCTLVSYLVMDEADLLLSFGYEEEMIKIRSKLPPTYQCLMT 274

  Fly   198 SATLTDDVVRMKGLCLNNPV-TLKLEEPELVPQDQLS-HQRILAEENDKPAILYALLKLRLIRGK 260
            ||||.||:..:|.|.:..|| |:||.|.:|...|||: :|.....:.::.|||.|:.||:||.|:
 Worm   275 SATLKDDMTTLKKLFMTGPVITIKLTEGDLPNSDQLTQYQLTCGSDEERFAILVAMFKLKLIVGR 339

  Fly   261 SIIFVNSIDRCYKVRLFLEQFGIRACVLNSELPANIRIHTISQFNKGTYDIIIASD------EHH 319
            ||:|||:||||||:.|.|..||:::|:|||.:|||.|.|.|:|||:|:|.|:||||      ...
 Worm   340 SILFVNTIDRCYKLMLILRVFGLKSCILNSAMPANSRCHVINQFNEGSYQIVIASDVSDADGSKL 404

  Fly   320 MEKPGGKSATN-RKSPRSG------DMESSASRGIDFQCVNNVINFDFPRDVTSYIHRAGRTARG 377
            .|:..|||... .|..:.|      |.||..||||||..|:||:|||||....:||||.||||||
 Worm   405 KEEIAGKSDEKPEKDEKKGKKASKLDKESGVSRGIDFHHVSNVVNFDFPETTDAYIHRVGRTARG 469

  Fly   378 NNKGSVLSFVSMKESKVNDSVEKKLCDSFAAQEGEQIIKNYQFKMEEVESFRYRAQDCWRAATRV 442
            .|||:.|||....|....:.:::::    ..|.|.::::.|:|:::|:::|..|.::.....|:.
 Worm   470 FNKGTALSFCIPSERAHLEQIQEEI----NQQMGRKVLQPYEFRIKELDTFLLRTREALSKCTKG 530

  Fly   443 AVHDTRIREIKIEILNCEKLKAFFEENKRDLQALRHDKPLRAIKVQS-HLSDMPEYIVPKALKRV 506
            .:...|::||:.|::....|:.||.:|:|:...::.|.....:|:.| .::|:..|:||:||:
 Worm   531 VIKKARLKEIRQELMRSANLQTFFAKNEREKLLMQTDCHPVMLKINSPAIADVTSYMVPEALR-- 593

  Fly   507 VGTSSSPVGASEAK----QPRQSAAKAAFERQVNDPLMASQV 544
             |...|..||...:    |..:...|..|:::..|||...::
 Worm   594 -GMDFSAPGAKNRRYNMGQKHRQKLKHKFQKKGKDPLKTFKI 634

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
Ddx56	NP_523434.2	DEADc_DDX56	16..221	CDD:350719	81/213 (38%)
		SF2_C_DEAD	232..387	CDD:350174	84/168 (50%)
C24H12.4	NP_740966.1	SrmB	90..543	CDD:440279	185/466 (40%)